Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3239 |
Symbol | |
ID | 4253807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 3870545 |
End bp | 3871027 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638119879 |
Product | hypothetical protein |
Protein accession | YP_735364 |
Protein GI | 113971571 |
COG category | [S] Function unknown |
COG ID | [COG2847] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00124495 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00000947918 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAGTTTA AGACATTGAA ACCGATATTC AAACAGATGT TTAATTTTGT CGCATTATCC TGTGCTTCAT TTTCTGTTTT CGCGAACGTA GTGATGACCG AAGGTCATGT CCGTGCAATG CCTGATACAG TACCAAATAC CGCCGCTTAC TTTACGCTGG AGAACCATAG CGATAAAACG GTTCGCCTCA CCGGAGTGAC GACTGAGGTC GCGAAGGAAG CACAATTACA TACCATCATC GAAGAACAAG GCATGGTAAA GATGCGCCAT GTTGAAGGTT TCGATATTCC CTCCCACGGA AAATTAACCC TCTCGCCGTC TGGAGAGCAT GTGATGCTCA TCGGACTCAA AGCCCCATTA GCCCTAGATC AGCAAGTTAA ACTGCAGTTA GCGTTTGACG ATGGCGAGAA TCTAACGATT ACATTACCTG TTGCTAAGCA GGCCGAGAAT GCTGCTGAAC ATGAGCATCA TCACCATCAT TAA
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Protein sequence | MEFKTLKPIF KQMFNFVALS CASFSVFANV VMTEGHVRAM PDTVPNTAAY FTLENHSDKT VRLTGVTTEV AKEAQLHTII EEQGMVKMRH VEGFDIPSHG KLTLSPSGEH VMLIGLKAPL ALDQQVKLQL AFDDGENLTI TLPVAKQAEN AAEHEHHHHH
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