| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3138 |
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| Symbol | |
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| ID | 4253709 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3757029 |
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| End bp | 3758945 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638119780 |
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| Product | peptidase U32 |
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| Protein accession | YP_735266 |
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| Protein GI | 113971473 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0826] Collagenase and related proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAGC CAGAGATTTA CACACCTGAG ACACTTTCTC ACGTTAATAA CCGCTTAGAG
TTATTGGCGC CTGCAAAAAA TGCCGATTAT GGCATTGAAG CCATTCGCCA TGGTGCCGAC
GCGGTTTATA TCGGTGGCCC CGCATTCGGC GCGCGTGCGA CCGCGGGTAA CAGTGTGGAA
GATATCGCCC GTCTGTGTAC TTTTGCTCAT AAGTATCATG CGCAAGTGTT TGTGGCTATT
AACACTATTC TGATGGACGA TGAGCTCGAA ACCGCTGAAA AGCTGATTTG GGATGTGTAT
AACGCGGGCG CCGATGCACT GATTGTGCAG GACATGGGCG TATTGCAACT TAACCTGCCG
CCGATTGCGC TACATGCTAG TACGCAAATG GATAACCGTA ATCCCGAGAA AGTCGCCTTC
TTAGAGCAAG TGGGTTTCTC ACAAGTAGTA TTGGCGCGTG AGTTAGGCTT AAGCCAAATC
CGTGAGGTTG CGGCTCACAC CAATATGCAG ATTGAGTTCT TTATTCACGG CGCCCTGTGT
GTGGCCTACA GTGGATTATG TAACTTAAGT CATGCCTTCA GTAACCGCAG TGCAAACCGT
GGCGAATGTT CGCAAATGTG TCGTCTGCCG GGCAATCTTA AGACCCGCCA AGGGGATGTG
TTGGCGCAAA ATGAGCACTT ACTCTCATTA AAAGACAATA ACCAAACCGA TAACCTCGAA
GCCTTGATTG ATGCCGGCGT TCGCTCCTTC AAAATTGAGG GGCGTTTAAA GGACTTAAGT
TATGTTAAAA ACGTGACCGC CCATTATCGT CAAAAGCTCG ATGCCATTAT GGCGCGTCGC
CCTGAGTTTG TAGCGTCATC CCATGGCCGT ACTGAACATA CCTTTACTCC GGATCCTGAA
AAAACCTTTA ACCGTGGCAG CACAGATTAC TTTGTGAATG AGCGTAGCCA AGGGATTAAA
GACTTCCGCT CGCCAAAATA TATCGGGCAA GATGTGGGTA AAGTGGTCGC CATCGGTAAA
GACTTTATTC AAGTCAGTTC AACCCACGAG TTTAATAACG GCGATGGTTT AGCGTATTTC
CCGCCAAACT ATGCGATGGC CAAACAGTCC GATGACAAAT TGCAGGGACT GCGTGTTAAC
CGTGCCGAAG GTCATAAGCT GCATGTATTG CAGGTGCCGC GCGATCTGCG TATCGGTATG
ACCTTATACC GTAACCATAA CCAAGCTTTC GAGACGTTAC TTTCTAAGGA GTCAGCCAAG
CGTATTATCG TCGTCGACAT GTGTTTAACC GATACTGCTA CGGGCGTGGC GCTGACCTTA
ACGGATATTT ACGGCCTCAG TGCAACGGTT GAGCTTGCAG TCGAAAAAAC GCCCGCCACC
GACGCTGAAA AAACCTTGCA GACTATCCGT ACTCAATTGT CGAAACTTGG TAGTACCGAT
TTTACAGCGC GCCAGATTAG TATCGAAACC GTCGAGCCTT GGTTCCTGCC TGCATCTGTG
CTCAACGGCC TGCGCCGTGA TGCGGTCGCA GCATTAGAAC TTGCCCGTGT TGAAGGTTAC
CAGCGTCCAA AACCTTGGAA ATATAATCAA GATGCCGTGT ATCCATTCAA ACACTTAAGT
TACTTGGGTA ACGTGGCAAA CGAAAAGGCG AAGGACTTTT ACCAACGCCA TGGCGTGATT
GAAATTCAGG ACACCTACGA GAAAAATGGC GTGACCGAAG ATGTGCCGTT AATGATCACT
AAGCATTGCC TGCGATTTAA CTTTAATCTC TGTCCTAAGG AAGTGCCGGG CATTAAGGCG
GATCCTATGG TGCTTGAGAT AGGTAACGAT GTGTTGAAGT TGGTCTTCGA CTGTCCAAAA
TGCGAGATGA TGGTCGTCGG TGAAAACCGC CAGGTTCGCG GTCAAAAAGC CGTTTAA
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| Protein sequence | MSQPEIYTPE TLSHVNNRLE LLAPAKNADY GIEAIRHGAD AVYIGGPAFG ARATAGNSVE
DIARLCTFAH KYHAQVFVAI NTILMDDELE TAEKLIWDVY NAGADALIVQ DMGVLQLNLP
PIALHASTQM DNRNPEKVAF LEQVGFSQVV LARELGLSQI REVAAHTNMQ IEFFIHGALC
VAYSGLCNLS HAFSNRSANR GECSQMCRLP GNLKTRQGDV LAQNEHLLSL KDNNQTDNLE
ALIDAGVRSF KIEGRLKDLS YVKNVTAHYR QKLDAIMARR PEFVASSHGR TEHTFTPDPE
KTFNRGSTDY FVNERSQGIK DFRSPKYIGQ DVGKVVAIGK DFIQVSSTHE FNNGDGLAYF
PPNYAMAKQS DDKLQGLRVN RAEGHKLHVL QVPRDLRIGM TLYRNHNQAF ETLLSKESAK
RIIVVDMCLT DTATGVALTL TDIYGLSATV ELAVEKTPAT DAEKTLQTIR TQLSKLGSTD
FTARQISIET VEPWFLPASV LNGLRRDAVA ALELARVEGY QRPKPWKYNQ DAVYPFKHLS
YLGNVANEKA KDFYQRHGVI EIQDTYEKNG VTEDVPLMIT KHCLRFNFNL CPKEVPGIKA
DPMVLEIGND VLKLVFDCPK CEMMVVGENR QVRGQKAV
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