Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3081 |
Symbol | pntA |
ID | 4253652 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 3685179 |
End bp | 3686705 |
Gene Length | 1527 bp |
Protein Length | 508 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 638119723 |
Product | NAD(P) transhydrogenase subunit alpha |
Protein accession | YP_735209 |
Protein GI | 113971416 |
COG category | [C] Energy production and conversion |
COG ID | [COG3288] NAD/NADP transhydrogenase alpha subunit |
TIGRFAM ID | [TIGR00518] alanine dehydrogenase [TIGR00561] NAD(P) transhydrogenase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGATTG GAATACCGAG AGAGAGTCTC GCCGGTGAGA CTCGGGTCGC CGCGACCCCT GCCACCGTCG AACAACTTAA AAAGCTCGGC TTTGAAGTTG TTGTTGAGGC CAATGCTGGC TTACTGTCTA GCTTTGACGA TGCCGCTTTT GAAGCCGCAG GGGCGAAGAT CACGGCAGAG GTTTGGCAAG CGGATCTGAT TTTTAAAGTC AATGCACCGA CCGATGCTGA AATTGCGCAA ATTAAAGATG GCGCGACCTT AATCAGCTTT ATCTGGCCCG CTCAAAATCC TGAGTTGGTC GAGAAACTGT CTAAACGCAA CATCAATGTG ATGGCGATGG ACATGGTGCC ACGTATTTCC CGTGCCCAAT CCCTCGATGC TCTCTCTTCT ATGGCCAATA TCGGCGGTTA TCGCGCCGTT GTTGAAGCCG CGCACCACTT TGGCCGTTTC TTTACTGGAC AAATTACCGC CGCGGGTAAA GTTCCTCCAG CAAAAGTGCT GGTGATTGGT GCCGGTGTGG CGGGTCTAGC GGCCATTGGT ACCGCAGGTT CATTAGGAGC TATCGTTCGC GCCTTTGACA CACGCTTAGA AGTGGCCGAA CAAATCGAAT CCATGGGTGG CCAGTTCCTC AAGCTGGACT TCACCAATGA AGATGGCAGC TCATCGGATG GTTACGCGAA AACCATGTCG GACGAGTTTA TCGCCGCCGA AATGGCACTG TTTGCCGAGC AAGCCAAAGA AGTTGATATC ATCATTACCA CAGCGCTGAT CCCAGGCCGC CCTGCACCTA AGCTCATCAC CAAGGCGATG GTCGACAGCA TGAAACCCGG CTCTGTGATT GTCGATATGG CCGCGCAAGC GGGCGGCAAC TGTGAATACA CTCAGCCTAG CGAGCTATTC GTGACCGAGA ATGGCGTTAA AGTCATCGGC TTTACCGATC TTCCCGGCCG CCTGCCCGCG CAGTCTTCAC AGCTTTACGG CACTAACTTA GTCAACCTGA TGAAGTTAAT GTGTAAAGAG AAAAATGGCG TCGCCAGCAT CAACTTCGAT GATGTGGTGA TGCGCAATAT GACAGTGGTC AAAGCAGGCG AAGTGACCTT CCCGCCACCG GCGATTTCGG TGTCGGCGGC GCCCGCCAAA CCTGCGGCTA AGGTTGAAGC CAAAGCGGCT GAGGCCAAAA AGCCATCCAA GCTTAAGTAT ATTCTCGCCG TCCTTGGTGT TGCAGGTTTT GCTGCGGTTG CCTCGGTTGC TCCAGCCGAG TTCTTATCCC ACTTTACGGT TTTTGTCCTG TCCTGCGTGG TGGGCTATTA CGTGGTGTGG AACGTATCCC ACTCACTACA TACGCCTTTA ATGTCAGTGA CTAACGCGAT TTCGGGCATT ATCGTGGTCG GCGCCTTGCT GCAAATTGGT CAAGGTTCAA CCTTGGTCAC TGTGCTGGCG TTTATCGCCG TGCTGATCGC CAGTATTAAC ATCTTCGGCG GTTTCACCGT CACTCAGCGC ATGCTGAAGA TGTTCCGTAA AGATTAA
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Protein sequence | MQIGIPRESL AGETRVAATP ATVEQLKKLG FEVVVEANAG LLSSFDDAAF EAAGAKITAE VWQADLIFKV NAPTDAEIAQ IKDGATLISF IWPAQNPELV EKLSKRNINV MAMDMVPRIS RAQSLDALSS MANIGGYRAV VEAAHHFGRF FTGQITAAGK VPPAKVLVIG AGVAGLAAIG TAGSLGAIVR AFDTRLEVAE QIESMGGQFL KLDFTNEDGS SSDGYAKTMS DEFIAAEMAL FAEQAKEVDI IITTALIPGR PAPKLITKAM VDSMKPGSVI VDMAAQAGGN CEYTQPSELF VTENGVKVIG FTDLPGRLPA QSSQLYGTNL VNLMKLMCKE KNGVASINFD DVVMRNMTVV KAGEVTFPPP AISVSAAPAK PAAKVEAKAA EAKKPSKLKY ILAVLGVAGF AAVASVAPAE FLSHFTVFVL SCVVGYYVVW NVSHSLHTPL MSVTNAISGI IVVGALLQIG QGSTLVTVLA FIAVLIASIN IFGGFTVTQR MLKMFRKD
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