Gene Shewmr4_3068 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3068 
Symbol 
ID4253639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3667067 
End bp3667906 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content51% 
IMG OID638119710 
Producthypothetical protein 
Protein accessionYP_735196 
Protein GI113971403 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.121658 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGATT CAGATATTTT AATGCTTGCG GATGAAGCGG CTCCCGCTGC CGAGGTCTCT 
GCCCGTAAAA AGGCTCTGGT ACTGGGTCGC CAACTCGGTC TCGCCAGTGA GCAGGAATAT
CGTCCCGCCA ATGCCTCGAT TGCCGAACGT GCCCAGTACA GAGAGCGTAA ACTCGCCAGC
CAATATCAGG CCAATGTCGA AACCATTTTC GCCCTCGCCT TGAGCTACAC CCCATCGGAT
GTTACCGGGG TCGATCTGGA CCCCGACTGG AGCCATCAAT TTTTTTTGAT GGCGGAGCAA
ATCCACAACC GCAAAATGCA GGATCTGTGG GCGCGCATCC TCTCCAGTGA AATCGTCAAT
CCGGGTAACT TTAGCCTGCG TACCTTAGCA CTGCTCAAGC AATTAACTCA CAGAGAAGCG
CAAATCCTCG AAAAGGCTCT CGGTATGGCG GCCAAGGTGA ATAATGAGCA GCGCTTAAAG
CTGATCAGCG GCTATCGGCT TACGGGCGGA CTCGGCCAAT ATTTTCGTAA GAACTCTAGC
GTGACTCTCG GCTTATCCCA ATTTGGTCTG CCCTACTCCA GCATTCTCAC CTTAGTCGAT
GCGGGGATCT TGCACAGCAG TGAGTTTGAA ACCGGTTTAC TCAACAGTAA AACCCCCATT
CAACTCACCA TGCCTGGCAT TCAAATGAAG CTCACTCCCA AAAGTGGTAA CTTACTGTTT
AGCTACTATC GATTAACCCC GATTGGCGAT GAGCTGGCGC AGCTTGTGTT ACCCAAACAG
GACCAAGAAT ACCTCAAGGC ACTTCAAGCC CTGTTTGCCA AGGATTTCAA AATTGAGTAA
 
Protein sequence
MKDSDILMLA DEAAPAAEVS ARKKALVLGR QLGLASEQEY RPANASIAER AQYRERKLAS 
QYQANVETIF ALALSYTPSD VTGVDLDPDW SHQFFLMAEQ IHNRKMQDLW ARILSSEIVN
PGNFSLRTLA LLKQLTHREA QILEKALGMA AKVNNEQRLK LISGYRLTGG LGQYFRKNSS
VTLGLSQFGL PYSSILTLVD AGILHSSEFE TGLLNSKTPI QLTMPGIQMK LTPKSGNLLF
SYYRLTPIGD ELAQLVLPKQ DQEYLKALQA LFAKDFKIE