Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3068 |
Symbol | |
ID | 4253639 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 3667067 |
End bp | 3667906 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638119710 |
Product | hypothetical protein |
Protein accession | YP_735196 |
Protein GI | 113971403 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.121658 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGATT CAGATATTTT AATGCTTGCG GATGAAGCGG CTCCCGCTGC CGAGGTCTCT GCCCGTAAAA AGGCTCTGGT ACTGGGTCGC CAACTCGGTC TCGCCAGTGA GCAGGAATAT CGTCCCGCCA ATGCCTCGAT TGCCGAACGT GCCCAGTACA GAGAGCGTAA ACTCGCCAGC CAATATCAGG CCAATGTCGA AACCATTTTC GCCCTCGCCT TGAGCTACAC CCCATCGGAT GTTACCGGGG TCGATCTGGA CCCCGACTGG AGCCATCAAT TTTTTTTGAT GGCGGAGCAA ATCCACAACC GCAAAATGCA GGATCTGTGG GCGCGCATCC TCTCCAGTGA AATCGTCAAT CCGGGTAACT TTAGCCTGCG TACCTTAGCA CTGCTCAAGC AATTAACTCA CAGAGAAGCG CAAATCCTCG AAAAGGCTCT CGGTATGGCG GCCAAGGTGA ATAATGAGCA GCGCTTAAAG CTGATCAGCG GCTATCGGCT TACGGGCGGA CTCGGCCAAT ATTTTCGTAA GAACTCTAGC GTGACTCTCG GCTTATCCCA ATTTGGTCTG CCCTACTCCA GCATTCTCAC CTTAGTCGAT GCGGGGATCT TGCACAGCAG TGAGTTTGAA ACCGGTTTAC TCAACAGTAA AACCCCCATT CAACTCACCA TGCCTGGCAT TCAAATGAAG CTCACTCCCA AAAGTGGTAA CTTACTGTTT AGCTACTATC GATTAACCCC GATTGGCGAT GAGCTGGCGC AGCTTGTGTT ACCCAAACAG GACCAAGAAT ACCTCAAGGC ACTTCAAGCC CTGTTTGCCA AGGATTTCAA AATTGAGTAA
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Protein sequence | MKDSDILMLA DEAAPAAEVS ARKKALVLGR QLGLASEQEY RPANASIAER AQYRERKLAS QYQANVETIF ALALSYTPSD VTGVDLDPDW SHQFFLMAEQ IHNRKMQDLW ARILSSEIVN PGNFSLRTLA LLKQLTHREA QILEKALGMA AKVNNEQRLK LISGYRLTGG LGQYFRKNSS VTLGLSQFGL PYSSILTLVD AGILHSSEFE TGLLNSKTPI QLTMPGIQMK LTPKSGNLLF SYYRLTPIGD ELAQLVLPKQ DQEYLKALQA LFAKDFKIE
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