| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2947 |
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| Symbol | |
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| ID | 4253518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 3521632 |
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| End bp | 3522114 |
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| Gene Length | 483 bp |
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| Protein Length | 160 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638119583 |
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| Product | methylation site containing protein |
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| Protein accession | YP_735075 |
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| Protein GI | 113971282 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0992621 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.405183 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAAATA AATTGCTTGG TTTCACACTG GTTGAACTGA TGGTTACTAT TGCAGTGGCT
GCAATATTAT TAACTATCGG AGTACCATCT TTAATATCCG TCTATGAAGG TGTGCGCGTT
AATAATAATA TCGCCAAAAT TCATGACATT ATGGTTTTTG CCAGAAATCA AGCCGTCAGT
TATGGCGCAA CAATTAAAGT TTGCGCATCA AATGGAAGTG CATGTGGTAC AAATTGGGGA
AATGGGATTA AAGTGATCAG CCCTGATAAT AAAGATATTC GCGTTATTGA CGCATTCAAT
ACAAATGACA GTGTAAAAAG CAATTCGGCG AGTTTTACCT TTAGCTCTGA AGGCATGTTA
TCAGCAAACA GCGCTGTAGA AATCATCTAC TGCCCTGGAG GCTCCGCGAC AAACTCCAAG
AGTGTAAACA TAAGCTCTAG CGGACTAATC TCCTACGGAG CAGATGGTAA AAGCTGTTCA
TGA
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| Protein sequence | MLNKLLGFTL VELMVTIAVA AILLTIGVPS LISVYEGVRV NNNIAKIHDI MVFARNQAVS
YGATIKVCAS NGSACGTNWG NGIKVISPDN KDIRVIDAFN TNDSVKSNSA SFTFSSEGML
SANSAVEIIY CPGGSATNSK SVNISSSGLI SYGADGKSCS
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