Gene Shewmr4_2602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2602 
Symbol 
ID4253173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3098155 
End bp3098742 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content51% 
IMG OID638119237 
Producthypothetical protein 
Protein accessionYP_734730 
Protein GI113970937 
COG category[S] Function unknown 
COG ID[COG3575] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000348759 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000414333 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTGAAA CGGAATTAGC TGCAGTATTA CGCACTTGGC TAAGCCAAGA TAAGCATCGG 
ATGAGGGCGC TTACATTGGC GCAGCAATGC GCCCAAGTGC ATCGCTTGCC GCAGTGGTGC
TTGGCGGCGG GGTTTGTCCG TAATCTGGTG TGGGACAAAT TGCACGATAT TCAGCAGCGT
CCGTTAAACG ATATCGATCT GATTTACTAT TGCCCCTTGG ATACTCGTCC CGAGCGGGAT
AGGGCGATAG AAGCATACCT GCAAACACTG GCGCCAGAGT TACCTTGGTC GGTAAAAAAT
CAGGCGCGCA TGCATCTTAA AAATCACGAC AACCCCTATC AATCGACACA GGATGCAATG
TGCTATTGGC CAGAACAGGA AACTGCCGTC GCCGTGTATC TTGCGCCAAT TCCTAACACA
CCCACTTCCG TCATCGAGAG CTTACAGCTT ATCGCTCCCT TCGGTTTAAC CTCATTATTT
GCCTTGCAGT TAACCCATAA TCCCAAGCGT GCGTTGGCGG TATTTGAGCA GCGCCTTGCC
GCAAAGGGTT GGCTTTCGCA ATATCCGAGG CTGACTTTGG CCGAGTAA
 
Protein sequence
MTETELAAVL RTWLSQDKHR MRALTLAQQC AQVHRLPQWC LAAGFVRNLV WDKLHDIQQR 
PLNDIDLIYY CPLDTRPERD RAIEAYLQTL APELPWSVKN QARMHLKNHD NPYQSTQDAM
CYWPEQETAV AVYLAPIPNT PTSVIESLQL IAPFGLTSLF ALQLTHNPKR ALAVFEQRLA
AKGWLSQYPR LTLAE