Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2514 |
Symbol | |
ID | 4253085 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 2992621 |
End bp | 2993343 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 638119149 |
Product | phage SPO1 DNA polymerase domain-containing protein |
Protein accession | YP_734642 |
Protein GI | 113970849 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1573] Uracil-DNA glycosylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.992291 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00085565 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATGACAG ACATGTCGCA CCCAGCTATC GAGCCAAACG GCTCAGCCGA GCTCAGTATA TTGCTCAAAC AAATCCGCGC TTGCCAACTG TGTCAGGGCG AATTGCCCCT ACCAGCAAAA CCCATCTTAC AAGCCAGTAG CCAAGCACGG ATCTTAATCG CTGGCCAAGC CCCCGGCGTA AAAACCCACC ATAAGGGCAT CCCCTTCGAC GATGCCAGTG GCGAGCGGCT GCGCGCTTGG CTTAATGTCA GTCGGGAACA ATTTTATGAC CCCGCACTGT TTGCCATAGT GCCGATGGGA TTTTGTTTTC CGGGAACCAT TGAACGCAAT GGAAAAAAGC AGGGTGATAA ACCGCCACGC CCCGAGTGCG CCGCAACTTG GCATGCGAAG TTATTGGCCT TGATGCCACA GATAGAATTA GTGCTGGTTC TTGGCCAATA TGCCATTGAT TACCATCTAC CGCGCACACG GGCCATAGAT ACCACAGACG AAGCGTTAAG CTCTCAAGCG ATAGTGGTAT CCACTCCTCA AACGAACAAG AAGATCACAG TGACCCAAGC CATTGAGCAA TGGTCGTTAT ATTGGCCTAG GCTGATGGTC ATGCCCCACC CTAGCCCGCG CAACAATCTT TGGCTAAAAC AGCATCCCGA GTTTGAGCGC GAACAGCTCC CCACACTTCA AGCGCGTATC GCAGGCCTGC TGGCAAGTTC TAAGCCTATG TAA
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Protein sequence | MMTDMSHPAI EPNGSAELSI LLKQIRACQL CQGELPLPAK PILQASSQAR ILIAGQAPGV KTHHKGIPFD DASGERLRAW LNVSREQFYD PALFAIVPMG FCFPGTIERN GKKQGDKPPR PECAATWHAK LLALMPQIEL VLVLGQYAID YHLPRTRAID TTDEALSSQA IVVSTPQTNK KITVTQAIEQ WSLYWPRLMV MPHPSPRNNL WLKQHPEFER EQLPTLQARI AGLLASSKPM
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