| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2512 |
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| Symbol | |
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| ID | 4253083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2989691 |
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| End bp | 2991778 |
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| Gene Length | 2088 bp |
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| Protein Length | 695 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638119147 |
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| Product | outer membrane protein precursor MtrB |
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| Protein accession | YP_734640 |
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| Protein GI | 113970847 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03509] decaheme-associated outer membrane protein, MtrB/PioB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.481344 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00380912 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAATTCA AACTCAATTT GATCACTCTA GCGTTATTAG CCAACACCAG CTTAGCCGTA
GCTGCCGATG GTTATGGCCT CGCCAATGCC AATACCGACA AAGTGAAACT CTCAGCATGG
AGCTGTAAAG GCTGCGTGGT TGAAACGGGC GTATCTGGCA CTGTCGGTGT CGGCGTAGGT
TACAATGGCG AAGAGGACAT TCGCTCTGCC AATGCCTTTG GTTCTAAAAA CGAAGTTGCG
GGCAAGTTCG ATGCAGACCT TGCTTACCGT GGTGAAAAAG GTTACCGCGC CAGTGTTGAA
GCCTATCAAC TGGGAATGGA CGGCGGACGT TTAGATGTGA ATGCGGGCAA ACAAGGCCAG
TACAATATCA ATCTGAACTA CCGCCAAATT GCCACCTACG ATAGCAATAG TGCCCTCTCG
CCCTATTCTG GTATCGGCGG CAATAACTTA ACCTTGCCCG ATAACTGGGT CACCGCAGGT
TCGAGCAGCC AAATGCCACT GTTGATGGAC AGCCTCAACA GCCTCGAGTT ATCACTGAAA
CGTGAACGCG CAGGCCTTGG GTTCGAATAT CAGGGTGAAT CGCTGTGGAG CACCTATGTG
AACTACATGC GTGAAGAAAA AACCGGTTTA AAACAAACCT CTGGTAGCTT CTTCAACCAA
TCTATGATGT TGGCAGAACC CGTGGATTAC ACCACTGACA CCATAGAAGC GGGCGTGAAA
CTTAAAGGCG ATCGTTGGTT CACAGCGCTC AGTTACAATG GTTCAATTTT CAAAAATGAA
TACAACCAGC TGAACTTTGA CAGTGCCTTC AACCCCACCT TTGGTGCGCA AACGACTGGT
GCCATTGCAC TCGATCCCGA TAACCAGTCA CACACTGTGT CGCTGATGGG TCAGTATAAC
GACGGCAGTA ACTCACTGTC TGGCCGTATT TTAACCGGAC AAATGAGCCA AGATCAGTCA
CTGGTGACCT CTGGCTACGG TTATCAACTG CCAACGGATG CGGTAGACGC CAAAGTCGAT
CTGCTGGGCA TGAACCTCAA AGTCGTGAGC AAGGTCAGCA ACTCCCTTCG CTTGACGGGT
AGTTACGATT ATTACGATCG TGACAACAAT ACCCCAATCG AAGAGTGGAC TCAGATCAGC
ATCAACAATG TCAGTGGTAA AGTGGCCTAT AACACCCCTT ACGATAACCG CACACAGCGC
TTTAAAGTGG CGGCGGATTA TCGTATTACC CACGGCATTA AGCTCGATGG TGGTTATGAC
TTCAAGCGTG ACGAACGTGA GTATCAAGAC CGTGAAAGCA CAGATGAGAA CACCGTTTGG
GCCCGTTTGC GCGTCAATAG CTTCGACATG TGGGACATGT GGGTAAAAGG CAGTTACGGC
AACCGTGACG GCTCACAATA CCAAGCGTCT GAATGGACGT CTTCTGAAAC CAACAGCCTG
TTACGTAAGT ACAACCTGGC TGACCGTGAC AGAACCCAAA TCGAAGCACG CATCACCCAT
ACGCCACTCG AAAGCCTGAC CATAGACTTC GGTGCCCGTT ATGCGCTGGA TGATTATACC
GATACTGTGA TTGGCTTAAC TGAGTCAAAA GACACCAGTT ACGATGCCAA TATCAGCTAT
ATGATCACCG CTGACTTACT GGCAACGGCC TTCTACAACC ACCAAACCAT AGAATCAGAA
CAAGCGGGTA GCAGCAATTA CAGCACCCCA ACCTGGACTG GCTTTATTGA AGACAAAGTG
GATGTGGTTG GCGCAGGCAT CAGCTACAAC AATCTGCTGG AGAACAAGTT ACGCCTAGGT
CTGGATTACA CTTACTCAGA CTCCGACAGT AACACTCAAG TCAGACAAGG TATCACCGGC
GACTATGGCG ACTATTTTGC CAAAGTCCAT AACATTAACT TATACGCTCA ATATCAAGCG
ACCGAGAAAC TCGCGCTACG CTTCGATTAC AAAATTGAGA ACTATAAGGA CAATGACGCC
GCTAACGATA TCGCCGTTGA TGGCATTTGG AACGTCGTAG GCTTTGGCAG CAACAGCCAT
GACTACACCG CACAAATGCT GATGCTGAGC ATGAGTTACA AGCTCTAA
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| Protein sequence | MKFKLNLITL ALLANTSLAV AADGYGLANA NTDKVKLSAW SCKGCVVETG VSGTVGVGVG
YNGEEDIRSA NAFGSKNEVA GKFDADLAYR GEKGYRASVE AYQLGMDGGR LDVNAGKQGQ
YNINLNYRQI ATYDSNSALS PYSGIGGNNL TLPDNWVTAG SSSQMPLLMD SLNSLELSLK
RERAGLGFEY QGESLWSTYV NYMREEKTGL KQTSGSFFNQ SMMLAEPVDY TTDTIEAGVK
LKGDRWFTAL SYNGSIFKNE YNQLNFDSAF NPTFGAQTTG AIALDPDNQS HTVSLMGQYN
DGSNSLSGRI LTGQMSQDQS LVTSGYGYQL PTDAVDAKVD LLGMNLKVVS KVSNSLRLTG
SYDYYDRDNN TPIEEWTQIS INNVSGKVAY NTPYDNRTQR FKVAADYRIT HGIKLDGGYD
FKRDEREYQD RESTDENTVW ARLRVNSFDM WDMWVKGSYG NRDGSQYQAS EWTSSETNSL
LRKYNLADRD RTQIEARITH TPLESLTIDF GARYALDDYT DTVIGLTESK DTSYDANISY
MITADLLATA FYNHQTIESE QAGSSNYSTP TWTGFIEDKV DVVGAGISYN NLLENKLRLG
LDYTYSDSDS NTQVRQGITG DYGDYFAKVH NINLYAQYQA TEKLALRFDY KIENYKDNDA
ANDIAVDGIW NVVGFGSNSH DYTAQMLMLS MSYKL
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