| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2479 |
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| Symbol | |
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| ID | 4253050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2947579 |
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| End bp | 2949039 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638119111 |
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| Product | protein of unknown function DUF463, YcjX family protein |
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| Protein accession | YP_734607 |
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| Protein GI | 113970814 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3106] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00553231 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGAATGC TTGACTTTTC GCTCCATAAA TTAACTCAGA AGAGCCAATC CCTGCTCCAT
AGAACGGCTG ACAGGCATTT ACGACTCGCG GTAACAGGGT TATCGGGGGC GGGCAAAACC
GCATTTATTA CCGGATTAGT CAACCAACTA CTCAATAGTG GCGCGGCTTC TCAGGTATCC
CATTCCCGCC ATGGGAATGC TTTACCTCTG TGGCAAGTGA GCCGTGAGCA ACGTTTGCTC
GGGGTGAAGC GAGCAATGCA GCCGGATCTT GAAATTGCCA GCTTCGATTA TCAGGGCGCA
ATGTTAGCGC TTACTTCGAC GCCTCCGACT TGGCCAGCAT CGACCCGCAC GATTTCGGAG
CTGCGCTTAG CCATCAAATA CCAGCCGCAG AAGGGGCTGC TAGCCAAGTT TGCCGATACC
GCAACGCTGT ATTTAGATAT TGTCGATTAT CCCGGCGAGT GGCTATTAGA TTTACCTATG
CTGCGTCAAA GCTTTATCGA GTGGTGCAGC GCGCAGCAAC AACGTGTCGC TGTGCTAAAA
AGCTCGCCTT TGTATGCAGA GTTTCAAACT TCGTTAAGTG CGCTCAATTT AACCGAGGCG
GCCGATGAGC TGCAGCTTAA ACGCATTGCC GATCAGTATC AGCAACTCTT GCACGATTTA
GTGCATGTGC AGGGTTATTA TCAGGCACAA CCCGGACGCA TGTTATTACC AGGGGAATGG
GAAGGCGCGC CGCTGCTGGC GTTTTTTCCG CTGTTATCGG TGACAGACAA TCAGTGGAGC
GAGCTCAAAC AAAGCGATAA ACACAGCGCC TTTCATGTCC TAGAAAAACG CTACCAAGAA
TACGTGGCTA AGGTCGTTAA ACCTTTCTAT AAGCAGCATT TTGCGGGGTT TGACCGCCAG
TTAGTGCTGG TTGATTGCTT CAGCGCCTTA AACCGCGGCA AAACCCAGTT TGAGGATATG
GGCGCCGCAT TAAATGCCAT TATGGAGAGT TTTCAATACG GCCAATCCAG TTACTTACGC
CGATTGTTTG CGCCGCGGAT AGACAGATTA TTATTTGCCG CCAGTAAGGT TGACCATGTG
ACGCGGGATC AGCAAAGTCA TGTGTTATCC CTGCTCACCG ATATGCTCAA ACATAGCCAA
CATTTTGCCA GTTTCGATGG TTGTAAAGTT GAGACTATGG CCATTAGTGC CATTAAGGCG
ACGCGTCATG GCATGGTGAC CACTCAAGAA GGGGATGTGG AAGTCGTGCA GGGGATTGGA
TTGAACGGCC AAGCCCTGAC GCTTTTTCCA GGCGAAGTGC CCACTCGCTT ACCCGAGCCC
AACTTTTGGC GCGACCAAGG GTTTCATTTT ATGGGATTTG CTCCGCCGAA TAACAGCAAT
GTGGACCCAT CTTCGGTGCA TTTTGACCAT ATCCGTCTCG ATCACCTTCT GCAGTATCTC
GTGGGGGATA AATTGGAATG A
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| Protein sequence | MGMLDFSLHK LTQKSQSLLH RTADRHLRLA VTGLSGAGKT AFITGLVNQL LNSGAASQVS
HSRHGNALPL WQVSREQRLL GVKRAMQPDL EIASFDYQGA MLALTSTPPT WPASTRTISE
LRLAIKYQPQ KGLLAKFADT ATLYLDIVDY PGEWLLDLPM LRQSFIEWCS AQQQRVAVLK
SSPLYAEFQT SLSALNLTEA ADELQLKRIA DQYQQLLHDL VHVQGYYQAQ PGRMLLPGEW
EGAPLLAFFP LLSVTDNQWS ELKQSDKHSA FHVLEKRYQE YVAKVVKPFY KQHFAGFDRQ
LVLVDCFSAL NRGKTQFEDM GAALNAIMES FQYGQSSYLR RLFAPRIDRL LFAASKVDHV
TRDQQSHVLS LLTDMLKHSQ HFASFDGCKV ETMAISAIKA TRHGMVTTQE GDVEVVQGIG
LNGQALTLFP GEVPTRLPEP NFWRDQGFHF MGFAPPNNSN VDPSSVHFDH IRLDHLLQYL
VGDKLE
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