| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2468 |
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| Symbol | |
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| ID | 4253039 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2934350 |
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| End bp | 2935558 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638119100 |
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| Product | porin |
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| Protein accession | YP_734596 |
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| Protein GI | 113970803 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000293387 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000118178 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACAAAA CGTTAGTAGC AACTGCGCTA GCAGCACTCT TTCTCGCTCC ATCAGTATCT
GCAATCGAAA TCTACAAAGA TGATAAAAAT GCAGTAGAAA TTGGTGGATT TATTGATGTG
CGCGTAATCA ATACCCAAGG TGAAACTGAA GTTGTTAATG GTGCTTCTCG AATTAATTTT
GGTTTCAGCC GTGAGTTAAC CCATGGTTGG AATGCATTTG CCAAATTGGA ATGGGGTGTG
AACCCTGTTG GCAACAGCGA CATTGTCTAT AACAACCGCT TTGAATCTGT GCAAGATGAG
TTTTTCTACA ATCGTTTAGG TTATGCAGGT ATAAGCCACG ATGAATACGG TACTATCACC
ATTGGTAAAC AATGGGGTGC TTGGTATGAC GTGGTTTATA ACACTAACTA CGGTTTTGTG
TGGGATGGTA ACTCAGCTGG TGTTTACACT TTTAACAAAG ATGACGGTGC GGTAAACGGC
GTTGGTCGTG GTGATAAAGT CGTTCAATAC CGTAACAGCA TAGGTGATGT TAGCTTTGCG
GTTCAGGCGC AATTGAAAAA CAGCAGCTTC TACACTTGTG ATATTGAGAA TATCACAGAG
GAAGCCTGTG AAGTTGAATG GAACGCTGGT AAGAAAGAAG CACAACAAGT TACCTATGAT
TACACCTATG GCGGTTCGGT GACTTATAAA GCGACCGAAA AACTCAGCTT GATGGCGGGT
GTCAACCGTG GTGAATTTGA TATTGCCTAT GGTAATGGTG AGCAAAAAAC CGCTGTTGAT
TTAATCTACG GTGTGGGTGC GACCTGGGGC GATTTCGACA AGAATGGCTT ATATGCTGCC
GCGAACGTTC ACAAAGAAGA GAACCATGAT ACCGACAACA TCGGCCGTTT GATTAAAGAT
GCCTACGGTG TTGAAACTTT AGTTTCTTAC AAGTTTGATA ACGGTTTACG TCCATTTGTT
TCTTATAACA TTCTGGATGC TGGTAAAGAC TATGTTATTC AACCAAACTT TAACGCCGAT
CCTAACGATG TGTTCAAGCG TCAGTTTGTG GTTGTAGGTT TACACTTTGT TTGGGATCCA
AACACAGTTC TTTATGTCGA AGCACGTAAA GACTACAGCG ACTTTACCAG CGCCGATCAA
GCACAAGAAG CCAGAATGTC ATTATCAGAG GACGACGGCA TCGCGATTGG TATTCGCTAT
ACGCTATAA
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| Protein sequence | MNKTLVATAL AALFLAPSVS AIEIYKDDKN AVEIGGFIDV RVINTQGETE VVNGASRINF
GFSRELTHGW NAFAKLEWGV NPVGNSDIVY NNRFESVQDE FFYNRLGYAG ISHDEYGTIT
IGKQWGAWYD VVYNTNYGFV WDGNSAGVYT FNKDDGAVNG VGRGDKVVQY RNSIGDVSFA
VQAQLKNSSF YTCDIENITE EACEVEWNAG KKEAQQVTYD YTYGGSVTYK ATEKLSLMAG
VNRGEFDIAY GNGEQKTAVD LIYGVGATWG DFDKNGLYAA ANVHKEENHD TDNIGRLIKD
AYGVETLVSY KFDNGLRPFV SYNILDAGKD YVIQPNFNAD PNDVFKRQFV VVGLHFVWDP
NTVLYVEARK DYSDFTSADQ AQEARMSLSE DDGIAIGIRY TL
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