Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2452 |
Symbol | |
ID | 4253023 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 2917332 |
End bp | 2918294 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638119084 |
Product | LysR family transcriptional regulator |
Protein accession | YP_734580 |
Protein GI | 113970787 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000000228881 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | GTGAGCAAAG TTCACACTAA ATACCCTTAT CAATTACTCG ATTCGGATAC GCCTATGTTT ACTTCCTTGC CGCCCCTCAA TGCATTACGG GCTTTCGAGT CTGCCGCCCG CTTGCAAAGC ATGACTCTTG CCAGCAAAGA ACTGCATGTC ACCCACGGCG CCATCAGTAA ACAAATCCGT GTACTAGAAG AATTCTTAGG TTTTGCCCTC TTCGTGCGCC TGCATAAAAA AGTCGCACTC ACGGACGAAG CCAAGCGCTA CTTGCCCCAT GTGCAAGCGG CTCTGCAAAC TTTGTCCAGT GCCACCGCCG ATTTACGTAG TCAAGGCTCG CGGCCACAAA CTTTAGCGAT CAATGTGTTA CCCAGTTTAA CCATCAACTG GTTAATCCCC CGGATGGAGC AATTTAAATC TCGGCATCCG CATGTGTATG TGGATCTTTC GATTGGTGAC TTCGCCGTCG ATTTCAGCCA AGGCCGTTAC GACATCGCCA TTCGTAGCAG CACTCAACTC CCCAGAGGGG TTAACTACAT CAAACTGATG GATGAAGACT TGTGCTTAGT GTGCGCGCCG TCACTCGCGC CTAAGCTCAA AAGTATCGAA GACATCAATC AGGTCACCCT GCTGAAACAC ACCACACGGC CAGAGCTTTG GGAATATTGG GCAGATAAAG TGGGACTGGT ACTCACGCAG GCGCAAACCT TTGGCGTCGA GCATTTTTAT ATGTTGAGTC AAGCCGCAGC CAGTGGCATG GGCGCTGCGC TGATCCCACG TTTTTTTATC GAAGATCAAT TGGCCAATGG CAGCTTAGTG ATCCCGTTTC AAGCGCCTTT TACCAGCCCA TACGCCTATT ACTTACTCAC GCCCAAATCC CCTAGCTTAC CGCTAAAGGT GCAAGCCTTT ATCGATTGGA TGCTCGAGTT ATTTGCCCCA TATCGGCAAT CGTCAGATAT CGACAAAGCT TAG
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Protein sequence | MSKVHTKYPY QLLDSDTPMF TSLPPLNALR AFESAARLQS MTLASKELHV THGAISKQIR VLEEFLGFAL FVRLHKKVAL TDEAKRYLPH VQAALQTLSS ATADLRSQGS RPQTLAINVL PSLTINWLIP RMEQFKSRHP HVYVDLSIGD FAVDFSQGRY DIAIRSSTQL PRGVNYIKLM DEDLCLVCAP SLAPKLKSIE DINQVTLLKH TTRPELWEYW ADKVGLVLTQ AQTFGVEHFY MLSQAAASGM GAALIPRFFI EDQLANGSLV IPFQAPFTSP YAYYLLTPKS PSLPLKVQAF IDWMLELFAP YRQSSDIDKA
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