Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2357 |
Symbol | |
ID | 4252928 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 2807934 |
End bp | 2808761 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638118982 |
Product | biotin biosynthesis protein BioC |
Protein accession | YP_734485 |
Protein GI | 113970692 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
TIGRFAM ID | [TIGR02072] biotin biosynthesis protein BioC |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0000020473 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCTATGC CGCTTGGCGT GAGTGTTAAT TCCCATCAAT CTGCCAGTCA GGTCGAGCAT ATTGCCGATC GGTTTTCTGC TGCTGCCAAG CACTATCAAG AGCATAACTG TTTACAGCGT TTAAGCGGCG CGAGTTTGTT GCAGGGATTT GCTGCCAAGG GCGCAATTCT CGATATTGGC GCGGGGCCGG GGACCGATTT CGCCAACCGA GCAAAGGGCG AGGAGATGAG GGTTTATGCC CTCGATATCG CTCTAGGGAT GCTGCAACAA CTTAAAGCGA CTTTCCCTAG CTACCAATGT GTGTGCGGTA ATGCCGAGCA ACTCCCCTTT GCCGATGGGA GTATCGATAG TATTTACTCC AATTTAGCTC TGCAGTGGTG CCAGGATTTT TCGGCTGCGA CCAGTGAAAT GGCTAGAGTC TTAAAATCTG GTGGAGAAGC GCATCTGAGT ATCGTGGCCG ACGGCAGCTT GGCGCAGTTA TCCCATCTTG GTTTGAGGGT GAACGGTTTT TTATCCCTTG AAAGCTTAAA GGCTGCCTTT GATACCTCTG ATTGGCAACT GTTTGATGTT CAACTTGTGC CAATGACCGT CTATTTTCAA GATCTTAAAA CCTTGCTCTA TTCTATTAAG GGCGTGGGCG CATCGGTGCA ATCCTCAGTA CAGACCATAG CTTCTTCAGA TCCCGAAGCC CATTTAGGCA AATTGCGTGG CCGCCGCGAT TGGCAGGCTT TACAGCAACG TGCTGAGCAG TTTCGTGAAA CACAAGGCTT GCCTTTAACC TATCAGATAG CTCAATTTCG TGTGCGTCGC CAAGGCGGCT CGGTATAA
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Protein sequence | MSMPLGVSVN SHQSASQVEH IADRFSAAAK HYQEHNCLQR LSGASLLQGF AAKGAILDIG AGPGTDFANR AKGEEMRVYA LDIALGMLQQ LKATFPSYQC VCGNAEQLPF ADGSIDSIYS NLALQWCQDF SAATSEMARV LKSGGEAHLS IVADGSLAQL SHLGLRVNGF LSLESLKAAF DTSDWQLFDV QLVPMTVYFQ DLKTLLYSIK GVGASVQSSV QTIASSDPEA HLGKLRGRRD WQALQQRAEQ FRETQGLPLT YQIAQFRVRR QGGSV
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