Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2244 |
Symbol | |
ID | 4252815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 2684501 |
End bp | 2685967 |
Gene Length | 1467 bp |
Protein Length | 488 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638118869 |
Product | hypothetical protein |
Protein accession | YP_734372 |
Protein GI | 113970579 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2267] Lysophospholipase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0117248 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0610259 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCCA TCATCATAGG CTCAACCAAG CATCTATTTT TCGCGGCATT TTATGCCTGT TTGGGGATTG CCGTCGCCCT GTTGGTGACA GGGATACACT TTCTCAATGC CAGACCCGAT CTCTCCCTCT GGCACACCAC AGAACTTAAA AACGAATTTC GCTACAACAC CAAATTAGAC AAATTCAGTG ATTACATCGC CTTAGAAGAT AAGTTATTTG CCGAAGTGGA GAATAAAGTC CTCAAAAAAG TCTCGGCGAC GGATGCTTCA CCCGTGAATC GTTATGTTAA AAATAGCCTG TCGGATCCCG CCCGTTGGCC CCATAACTGG AATCGCACCT TCGAGTGGCC TAAAGCCAAT GCGCCCTTTG GTGTACTCCT TCTCCATGGT ATGTCTGATT CACCCTATGC CATGTCAAAT GTGGCGGCTC ATTTTAAAGA CAAAGCCCAT GTGCTTGGAT TAAGACTCCC AGGACACGGC ACCATCCCAA GTGGCCTAAC TAGTCTCTAT TGGCAAGACT TAGCCGCTGC GGTGAATCTG GCAACAGCCC ATATGAAACA AGAGCTTAAA GGTAAGCCGC TGTTTGTGAT TGGCTTTTCA ACAGGCGCCG CGGTTGCCCT TAATCATGAG CTTGAGTTAA TTAATCAGGA TAAAACGCCC GATTATGCAG GGATGATTTT TATGTCCCCT GCAATAGGGC TTGCCCCTAT TGCGGCGGCG GCTCGTTGGC AGAGCTGGAT TGGCCGTTTG CTCGATTTAG ATAAGTTGCA GTGGAACAGT ATTCAGATGG AATACGATCC CTTTAAATAC ACTTCATTTG CAGTGAATGC GGGTGATGTG GTTTACCAAT TGGCGCTGCG TAATCAAAGT CTATTGAGTG GACTAAGGCC TTCGCAGCGC GAACAGATCC CATCCATACT CACTTTTCAA TCCGTCGCTG ATGCGACGGT TTCGAGCGCC GCCGTGGTCG ATCTGCTTTA TCAAGTGCTG CCTGAAAAAG GCCATGAGCT AGTGTTGTTT GATATGAATC GTACCGTGAT TAACAGCAAG TTGATGACAA ATGATCCGCT GCCATCTTTG TTAGCGACAT CCCGTGACAA TATCCATTAC CGTGGAACGC TGATTGAAAA TATCGATAGT GAAACCACTC AAGTCCAAGC TCGGGAGTTT GGGCTTATGT TGCAAGATAA CAGTATGCCG GAGGTGGAAG CTTTATCCTT ACATTGGCCT TTAGGCGTGT ATTCCTTGTC CCATGTTGCC TTGCCATTTA ATGAAGATGA TGGACTATAT GGCATTAAAA ACAATGGAAA ATTACTCAGG ATCCAGATTG GCGCTGCCGC ATCCCGAGGC GAGCGCGGCG TTTATAGCGT GCCCGCTTCG GAAATGTTAC GCCAAAAGTG GAATCCATTT TTCCCTTACA TGTTGACGCG GATTGACCAA TATCGCACCG CACACATGCC CCATTAA
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Protein sequence | MKAIIIGSTK HLFFAAFYAC LGIAVALLVT GIHFLNARPD LSLWHTTELK NEFRYNTKLD KFSDYIALED KLFAEVENKV LKKVSATDAS PVNRYVKNSL SDPARWPHNW NRTFEWPKAN APFGVLLLHG MSDSPYAMSN VAAHFKDKAH VLGLRLPGHG TIPSGLTSLY WQDLAAAVNL ATAHMKQELK GKPLFVIGFS TGAAVALNHE LELINQDKTP DYAGMIFMSP AIGLAPIAAA ARWQSWIGRL LDLDKLQWNS IQMEYDPFKY TSFAVNAGDV VYQLALRNQS LLSGLRPSQR EQIPSILTFQ SVADATVSSA AVVDLLYQVL PEKGHELVLF DMNRTVINSK LMTNDPLPSL LATSRDNIHY RGTLIENIDS ETTQVQAREF GLMLQDNSMP EVEALSLHWP LGVYSLSHVA LPFNEDDGLY GIKNNGKLLR IQIGAAASRG ERGVYSVPAS EMLRQKWNPF FPYMLTRIDQ YRTAHMPH
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