| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2066 |
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| Symbol | |
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| ID | 4252639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2459326 |
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| End bp | 2461755 |
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| Gene Length | 2430 bp |
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| Protein Length | 809 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638118690 |
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| Product | electron transport complex protein RnfC |
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| Protein accession | YP_734196 |
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| Protein GI | 113970403 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4656] Predicted NADH:ubiquinone oxidoreductase, subunit RnfC |
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| TIGRFAM ID | [TIGR01945] electron transport complex, RnfABCDGE type, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00275367 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGACTT TATTAGATCA ATTAGATAAA GGAACCCTTT GGCGCTCACC CGGTGGCATT
CATCCACCTG AAGTCAAATT CCTCTCCAAC ACGACACCGA TTAGCCAACT GCCCTTAGCG
CAGGAATACC TTGTACCCGT GCCACAGGTG GGTGAAAACT GCACCCTTGT AGTCAAAGTG
GGTGACAAAG TATTAAAAGG CGCGCCATTA ACTCAAGGCA CCTCGATTTG GCATTTGCCA
GTACATGCGC CAACCTCTGG CACGGTCGTC GCCATTGAGC CAAGAGCCAG TAACCACGCC
TCGGCCTTGC CGGTCAATAC CTGCGTGATT GCCGCCGATG GTGAAGACCG CTGGTGCGAG
TTAACGCCAG GCTCAATTGA GCTTAGCAAT CATGAGATGA TTGCCAAAAT CCATGGTGCA
GGCATTGCCG GTATGGGCGG CGCCGCCTTC CCAAGCCATA TCAAGCTGAA TCCCGTCAGT
GAAATCGAAT TAGTGATTAT CAACGGCGTG GAATGTGAGC CTTATATCAG CGCCGACGAT
CGCTTAATGC GCGAATACAG CCAAGACATT CTGGCGGGGA TTGGGATTAT CCATCGCCTC
CTCGCGCCCA AGCGTATTGT GATTGCTATC GAAGACAACA AGCCCGAAGC CATCAAAGCC
ATGCAACAGG CGGTGAGTCA ATCCACGCTC CCTGCGGGCA GCACGCGGGT GACAGCGATA
CCAACCAAGT ATCCTTCTGG CGGTGAAAAG CAGCTTATTC AGATCATCAC GGGGCGTGAA
GTGCCCTCAG GCTCCATCCC CGCTAAGCTT GGGATTGTCG TGCATAACGT AGGAACCGCG
TTTGCGATTC ACCAAGCCGT GACCCAAGGT AAACCGTTGA TTGAGCGAGT GGTTACCGTT
ACCGGACAAA ATATCGGTAA GCCCGGCAAC TATTGGTTAC CCATAGGCAC GCCCGTTGAA
CATGTGCTCA AACACACTGA ATTTAACGCA GAAGCCGATC AAAAAGTGAT TATTGGCGGT
CCTATGATGG GCCATGCGTT ACCCACCATC CAAGTGCCTA TTTTAAAGGG CACAAACTGT
ATTTTGGTGC CAAGCAGTCA AGAGATTGGA ACCACTCCAG AGGAAAAGGC CTGTATCCGC
TGCGGCGAAT GTGCCAATGC CTGCCCTGCA CTCTTGCTAC CACAACAACT GTTTTGGCAT
GCAAAAGCCG AAGAATATGA CAAGGCGGCC AGCTACAACC TTAAAGATTG CATCGAATGC
GGTTGCTGTA GCTACGTGTG CCCCAGTGAT ATACCACTGG TGGAATATTA CCGCATCGCT
AAATCGGCAC TAAAACAAGC CGCCGATGAA AAACATCAAG CCGAGCGCGC CAAACTGCGT
TTCGAGGCGC GTATTCAACG CCTCGAAGAA GAAAAACTCG CCCGCGAAGC CAAGGCTAAG
GAAGCCGCTG CGCGTCGCCA AGCAACCATG AGCTCAACGG ATAAAAATGC CGTTGCCGAA
GCCATGGCGC GGATCGCGGC CAAAAAGGCA GCTGCGGCAG AAACCACAGC TGATAACACG
CAGGTCGAAG TTGTAAATGC TGATGCAAAC AGCACTGAGG CGCCTAAGGG GAAAGCAGCC
GTAGCCGCCG CGATTGCCCG CGCTAAAGCC AAGAAAGCTG CCGCTGCAGC TCAAAGTGCG
GATGATGCAG AATCGTCTCA ACAAGCAGTC TCTTCTGAAC AAACGGTATC TTCTGAGCAA
AGCGAGCCAA CTGAGCAGGC TGAGACGTTA TCGCAAAAAG ATAAAGTCGC CGCAGCCATC
GCTCGCGCCA AAGCGAAAAA AGCGGCGTTG AAGGCCGACT CGGATCCCAA TAGCGATACT
GATGCCGCGA CAGACAACAC AGATAAGCCA GCAACAGAAA CGACTGCTAA CGCAGAAGCG
GATGACAAAA AAGCCAAGGT CGCTGCAGCC GTTGCCCGTG CAAAAGCCAA AAAAGCCGCC
GCGCAGCAAG CTGAATCAAC TGATGTTGTT GACGAGCAGC CCAAGCTAGC TGCAGACGCT
CAGCCAGCTT CAAGCTCTGA ATTTGGCAAT GAATCAAGTT CAGTCGCTGA ACCAAACGCA
CCACTCAGTC CCGAAGATGA GAAGAAAGCC AAAGTCGCAG CTGCCGTTGC CCGCGCAAAA
GCAAAGAAAG CCGCCGCACA GCAAGCTGAT TCGACTGAGG TTACCGAAGT TCAGCCCGAG
TTAGTCTCAG TTGCTAAGCC TGAATCAGAC ATTGAGTCAG GTTCTGAATC AGACTCTGAA
TCAGGCGATG AATCAAGCTC AGTCGCTGAA CCAAGTGCGC CACTCAGTCC CGAAGATGAG
AAGAAAGCCA AGGTCGCTGC TGCCGTTGCC CGTGCGAAAG CCAAAAAAGC GGCCAGAGAA
GCGAATGCGA TCAGCGACGC AAATGAATAG
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| Protein sequence | MLTLLDQLDK GTLWRSPGGI HPPEVKFLSN TTPISQLPLA QEYLVPVPQV GENCTLVVKV
GDKVLKGAPL TQGTSIWHLP VHAPTSGTVV AIEPRASNHA SALPVNTCVI AADGEDRWCE
LTPGSIELSN HEMIAKIHGA GIAGMGGAAF PSHIKLNPVS EIELVIINGV ECEPYISADD
RLMREYSQDI LAGIGIIHRL LAPKRIVIAI EDNKPEAIKA MQQAVSQSTL PAGSTRVTAI
PTKYPSGGEK QLIQIITGRE VPSGSIPAKL GIVVHNVGTA FAIHQAVTQG KPLIERVVTV
TGQNIGKPGN YWLPIGTPVE HVLKHTEFNA EADQKVIIGG PMMGHALPTI QVPILKGTNC
ILVPSSQEIG TTPEEKACIR CGECANACPA LLLPQQLFWH AKAEEYDKAA SYNLKDCIEC
GCCSYVCPSD IPLVEYYRIA KSALKQAADE KHQAERAKLR FEARIQRLEE EKLAREAKAK
EAAARRQATM SSTDKNAVAE AMARIAAKKA AAAETTADNT QVEVVNADAN STEAPKGKAA
VAAAIARAKA KKAAAAAQSA DDAESSQQAV SSEQTVSSEQ SEPTEQAETL SQKDKVAAAI
ARAKAKKAAL KADSDPNSDT DAATDNTDKP ATETTANAEA DDKKAKVAAA VARAKAKKAA
AQQAESTDVV DEQPKLAADA QPASSSEFGN ESSSVAEPNA PLSPEDEKKA KVAAAVARAK
AKKAAAQQAD STEVTEVQPE LVSVAKPESD IESGSESDSE SGDESSSVAE PSAPLSPEDE
KKAKVAAAVA RAKAKKAARE ANAISDANE
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