| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1982 |
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| Symbol | |
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| ID | 4252555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2356875 |
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| End bp | 2357822 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638118595 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_734112 |
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| Protein GI | 113970319 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3507] Beta-xylosidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000010784 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0338284 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGG CATTTTTGAG TGTGTGTTTG GCATTGAGTA CGAGTGTCAG CACTGCAGCG
ATTGCTGCTA ACCCTCTGTT TACGGATGTA TTTACCGCCG ATCCTGCCGC CATAGTGCAT
CAAGATACTG TTTATCTTTA TACTGGTCAT GACGTTGCAA AGGACAATCG CACCTTCTTC
GAAATGCATG ATTGGCTCGT TTTTAGCTCT AAGGATATGC ACAATTGGAC GGCCCATGGC
AGCAAGTTAT CTGTGAAAGA TTTCAGCTGG GCTAAAGGAG ATGCATGGGC TAGCCATGTG
ATCGAAAAAG AAGGTAAGTT TTACTGGTAT GTAACGGCAA GACACAACAA AATCAATGGT
TTTGCGATTG GTGTCGCGGT TGCAGATAGT CCACTTGGCC CCTTCAAGGA TGCCCGCGGC
AGCGCCCTCA TCACTAATGA CATGACCACT GATACCGAGA TTGATTGGGA TGATATCGAT
CCTGCTGTCT TTATCGATGA TGACAAGCAA GCCTATCTGT TTTGGGGCAA CACTAAGCCA
AGATTTGCCA AGTTAAAAGC CAATATGATT GAACTCGATG GCCCAATACA CGCCATTGAT
GTCCCTAACT TTACCGAAGC GCTTTGGGTT CATAAAAAAG ATAAAACTTA TTATCTTTCA
TACGCTTCAG GCTTCCCTGA AAAAATTGCC TATGCAACCA GCGATAGTAT TCTGGGGCCG
TGGAAGTACC AAGGCATCTT AAATGAAGTG GCGGGCAACT CGCCGACAAA CCATCAAGCG
ATTATTGAAT TTAAAGGGAA ATCCTACTTT ATCTACCATA CCGGCGCATC GCAGGATGGT
GGCGGTGAGT TTAGACGTTC AGTGGCAATT GACCCGCTGC ATTACAATGC CGATGGCACC
CTACAGCGCA TTCATATGAC GAGCGAAGGC ATCAGCGAGC CGCAGTAA
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| Protein sequence | MKKAFLSVCL ALSTSVSTAA IAANPLFTDV FTADPAAIVH QDTVYLYTGH DVAKDNRTFF
EMHDWLVFSS KDMHNWTAHG SKLSVKDFSW AKGDAWASHV IEKEGKFYWY VTARHNKING
FAIGVAVADS PLGPFKDARG SALITNDMTT DTEIDWDDID PAVFIDDDKQ AYLFWGNTKP
RFAKLKANMI ELDGPIHAID VPNFTEALWV HKKDKTYYLS YASGFPEKIA YATSDSILGP
WKYQGILNEV AGNSPTNHQA IIEFKGKSYF IYHTGASQDG GGEFRRSVAI DPLHYNADGT
LQRIHMTSEG ISEPQ
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