| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1886 |
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| Symbol | thiH |
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| ID | 4252460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2245438 |
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| End bp | 2246553 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638118497 |
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| Product | thiamine biosynthesis protein ThiH |
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| Protein accession | YP_734017 |
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| Protein GI | 113970224 |
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| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
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| TIGRFAM ID | [TIGR02351] thiazole biosynthesis protein ThiH |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTTG TCGACCAATT TGCCCGCATT GAACGGGATA AGTTATTGCT GGCGTTATAT
TCCTGCACGG CAGCGGAGGT TGAGCGCGCC CTGATGCAAC CCGAGGGTAA TCTAGAGAGT
TTACTCGCCT TGTTGTCTCC AGCAGCAGAG CCCTATATCG AAGAGATGGC GCAGCGCTCG
GCGGCGCTCA CTCGGCAACG CTTTGGGGCC AATATTGGAC TCTATTTGCC GTTATATCTG
TCAAATCTGT GTGCCAACGA GTGCGACTAT TGCGGCTTTA GCATGAGCAA TAAGTTAAAG
CGTAAAGTGC TCAATGAGCA GGAAATTGCG GCCGAAATGG CGATTATTAA ATCCCGTGGT
TTTGACTCCA TCTTACTGGT GTCGGGTGAG CATGAAACCA AAGTGGGGAT AGATTACTTT
AAGCGCGTGT TACCCATTGT AAAACAGCAG TTTAGTTATT TGGCTATGGA GGTTCAGCCG
CTTGAAGAGA TTGATTATCG CCAGCTTGTC GAGCTAGGGC TTGATGCTGT GATGGTGTAT
CAGGAAACCT ATCAAGCGGC GACCTATGCT AAGCATCACA CCCGAGGCAA TAAGCAGGAC
TTTGCGTATC GGCTCGCAAC GCCCGACCGC GTTGCCAGCG CAGGTGTCGA TAAGATTGGC
CTAGGCGTGT TATTGGGTTT GGATGACTGG CGACTCGATG CCTTACTGAT GGGGCATCAT
TTGGACTATT TAGAACGGCA TTATTGGCGG ACTCGCTTTA GTATTTCGTT ACCTCGTTTG
CGGCCTTGTA CCGGCGGCAT AACACCAAAA GTGCATTTAA CCGATCTTGG ACTGGTACAA
TTGATCTGTG CCTTCAGGCT TTTTAATCAG CAACTTGATA TCAGTTTATC GACACGCGAG
GCGCCATCAC TTCGGGATAA TTTGCTGCCA CTTGGGATAA CACAAATGAG TGCGGGGAGT
TCAACGCAAC CTGGTGGTTA TCAGGCGCCA GAGAGCCAAT TAGATCAGTT TGAGATAAGC
GATGAACGTA CCGTTGAGCA AGTCATGACT CAGATGCGCC TTCGGGGATT TAATCCGGTT
TTTAAGGATT GGGAATCGGC TTGGATTGCG GGTTAG
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| Protein sequence | MSFVDQFARI ERDKLLLALY SCTAAEVERA LMQPEGNLES LLALLSPAAE PYIEEMAQRS
AALTRQRFGA NIGLYLPLYL SNLCANECDY CGFSMSNKLK RKVLNEQEIA AEMAIIKSRG
FDSILLVSGE HETKVGIDYF KRVLPIVKQQ FSYLAMEVQP LEEIDYRQLV ELGLDAVMVY
QETYQAATYA KHHTRGNKQD FAYRLATPDR VASAGVDKIG LGVLLGLDDW RLDALLMGHH
LDYLERHYWR TRFSISLPRL RPCTGGITPK VHLTDLGLVQ LICAFRLFNQ QLDISLSTRE
APSLRDNLLP LGITQMSAGS STQPGGYQAP ESQLDQFEIS DERTVEQVMT QMRLRGFNPV
FKDWESAWIA G
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