Gene Shewmr4_1748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1748 
Symbol 
ID4252322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2074099 
End bp2074542 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content45% 
IMG OID638118359 
Productheat shock protein Hsp20 
Protein accessionYP_733879 
Protein GI113970086 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0323144 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTACTT ATGATTTAAC TCCTCTTTAC CGTAGTGCTA TTGGTTTTGA TCGTTTAGCC 
CAGATGGCAG AACATGCTGC CGCGAATAAT GGCAACTCAG GTTATCCTCC ATATAACATT
GAACTCCTTG GCGAAAATCG TTATCGCATT ACGATGGCCG TGGCCGGGTT CTCGATGGAA
GAGCTTGAGA TCAGTAGTGA AGGTGAGAAA TTACTGGTTA AAGGCAATAA AGCCGAAAGC
CAAACCGAGC GTAAATACCT ATACCAAGGT ATTGCCGAGC GCGGGTTTGA ACGTACCTTC
CAACTGGCGG ATTATGTGAC CGTATTGGGT GCCAGTTTAG AGAATGGTTT ATTGAACATT
GATTTAGTGC GTGAAATCCC AGAAGCGTTA AAACCACGCA AGATTGAAAT CACCACCTCG
CGCCTATTAG ATGGTCAATC CTAA
 
Protein sequence
MRTYDLTPLY RSAIGFDRLA QMAEHAAANN GNSGYPPYNI ELLGENRYRI TMAVAGFSME 
ELEISSEGEK LLVKGNKAES QTERKYLYQG IAERGFERTF QLADYVTVLG ASLENGLLNI
DLVREIPEAL KPRKIEITTS RLLDGQS