Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1748 |
Symbol | |
ID | 4252322 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 2074099 |
End bp | 2074542 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638118359 |
Product | heat shock protein Hsp20 |
Protein accession | YP_733879 |
Protein GI | 113970086 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0071] Molecular chaperone (small heat shock protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0323144 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTACTT ATGATTTAAC TCCTCTTTAC CGTAGTGCTA TTGGTTTTGA TCGTTTAGCC CAGATGGCAG AACATGCTGC CGCGAATAAT GGCAACTCAG GTTATCCTCC ATATAACATT GAACTCCTTG GCGAAAATCG TTATCGCATT ACGATGGCCG TGGCCGGGTT CTCGATGGAA GAGCTTGAGA TCAGTAGTGA AGGTGAGAAA TTACTGGTTA AAGGCAATAA AGCCGAAAGC CAAACCGAGC GTAAATACCT ATACCAAGGT ATTGCCGAGC GCGGGTTTGA ACGTACCTTC CAACTGGCGG ATTATGTGAC CGTATTGGGT GCCAGTTTAG AGAATGGTTT ATTGAACATT GATTTAGTGC GTGAAATCCC AGAAGCGTTA AAACCACGCA AGATTGAAAT CACCACCTCG CGCCTATTAG ATGGTCAATC CTAA
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Protein sequence | MRTYDLTPLY RSAIGFDRLA QMAEHAAANN GNSGYPPYNI ELLGENRYRI TMAVAGFSME ELEISSEGEK LLVKGNKAES QTERKYLYQG IAERGFERTF QLADYVTVLG ASLENGLLNI DLVREIPEAL KPRKIEITTS RLLDGQS
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