Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1582 |
Symbol | |
ID | 4252159 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 1866277 |
End bp | 1867590 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638118195 |
Product | sodium:dicarboxylate symporter |
Protein accession | YP_733716 |
Protein GI | 113969923 |
COG category | [C] Energy production and conversion |
COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.147509 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACCT TATTAAAAAA GAAATTCGGC CTTACAAGTA AAATTCTGTT CGGTATGGGA ACAGGTATTG TTTTAGGTCT CATACTCCGC AATGCCTTTC CAGAAAGCGA TATCGTAAAA GACTACATTA CAGAAGGTTT CTTACATGTT ATCGGCACCA TTTTTATCTC AAGTTTGAAA ATGTTAGTGG TTCCACTGGT ATTTATTTCA TTAGTTTGTG GTACTTGCTC ACTGAGTGAA CCTTCAAAAT TAGGCCGTTT AGGTGGCAAA ACCTTAGCCT TCTATTTATT TACCACCGCT ATTGCTCTTG TGGTCGCGAT TATCAGTGCC GTCCTTATAC ACCCAGGTAA CGCTTCACTC GCTTCAGAAA AAATGGAGTA CGTCGCCAAA GAAGCACCCA GTCTTTCAAG TGTACTAATC AATATAGTGC CAACGAATCC GATGCAAGCA ATGAGCGAAG GAAATATGCT GCAAATAATT ATTTTTGCAG TAATTTTTGG CTTTGCTATT GCCCATATTG GTGAGCGAGG AAAACGTGTT GCCGCTTTAT TTGAAGATTT AAATGAAGTC ATTATGCGAG TCGTTACCTT GATCATGCAG CTTGCGCCTT ATGGGGTGTT TGCGCTAATG GCAAAACTGG CATTAACGCT AGGCTTAGGA ACATTTGAGA GTGTGGTCAA ATATTTCTTC GTGGTTCTTG GTGTACTACT GCTCCATGCG TTTATCGTCT ATCCGACCCT GCTTAAGTTA TTCTCAGGCT TAAATCCGCT GATCTTTATT CGTAAGATGC GCGATGTGCA GTTGTTTGCC TTCTCAACGG CAAGCTCTAA CGCTACCTTA CCTATTACGA TTGAAGCCTC AGAGCACAGA CTCGGTGTTG ATAACAAAAT TGCCTCTTTC ACCCTCCCCT TAGGCGCGAC CATTAACATG GATGGCACGG CGATTATGCA AGGTGTAGCT ACCGTATTTA TCGCCCAAGT CTTTGGTATT GAGTTGACCC TGACCGATTA TGCTGCAGTC GTTGTCACCG CCACTTTGGC CTCAATTGGT ACAGCTGGCG TGCCGGGTGT TGGGTTAATT ATGCTCGCGA TGGTGCTTAA CCAAGTCGGC CTCCCCGTTG AAGGTATTGC CTTAATTATT GGTGTTGACC GACTATTAGA TATGGTGCGT ACCGCCGTTA ACGTGACGGG CGATTGCGTC GCAACTGTGG TGATTGCTAA ATCTGAAGGC GAATTTAACG AAGCGGTATT CAACAATACC CAAGCGGGAA AAGTTGCCCC TAGCTTCGAT GAACAAGTGC ATAAAGTGGA GTAA
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Protein sequence | MATLLKKKFG LTSKILFGMG TGIVLGLILR NAFPESDIVK DYITEGFLHV IGTIFISSLK MLVVPLVFIS LVCGTCSLSE PSKLGRLGGK TLAFYLFTTA IALVVAIISA VLIHPGNASL ASEKMEYVAK EAPSLSSVLI NIVPTNPMQA MSEGNMLQII IFAVIFGFAI AHIGERGKRV AALFEDLNEV IMRVVTLIMQ LAPYGVFALM AKLALTLGLG TFESVVKYFF VVLGVLLLHA FIVYPTLLKL FSGLNPLIFI RKMRDVQLFA FSTASSNATL PITIEASEHR LGVDNKIASF TLPLGATINM DGTAIMQGVA TVFIAQVFGI ELTLTDYAAV VVTATLASIG TAGVPGVGLI MLAMVLNQVG LPVEGIALII GVDRLLDMVR TAVNVTGDCV ATVVIAKSEG EFNEAVFNNT QAGKVAPSFD EQVHKVE
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