Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1568 |
Symbol | |
ID | 4252146 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 1850601 |
End bp | 1851326 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638118182 |
Product | fatty acid metabolism regulator |
Protein accession | YP_733703 |
Protein GI | 113969910 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | [TIGR02812] fatty acid metabolism transcriptional regulator FadR |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000521117 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTATCA ATGCCAAAGG ACCTGCAAGT TTTGCAGAGA AGTATATTGT AAGATCGATT TGGGAAAACA AGTTTCCCCC AGGGTCCATT TTACCGGCTG AACGTGAGCT TTCTGAATTG ATTGGCGTAA CACGCACGAC ACTGCGTGAA GTTTTGCAAC GCTTAGCCCG TGATGGTTGG TTGAAAATCC AACATGGTAA ACCGACTCGG GTAAACAATT TTTGGGAAAC CTCAGGCCTT AACATTCTCG AGACGATTGC AGATCTCAAC CCTGAAGGCT TCCCTGTGCT GGTGGACCAA TTGCTGTCGG CTCGAACCAA TGTGAGCGCG ATTTATTTCC GTGGTGCACT GCGCAACAGC CCTGACACCG CCGTTGAAGT GTTAGCACAA ATTCATCAAT TAGAAGATAC GGCAGAATCC TTCGCCGAGT ATGACTACTT ATTGCATCAT ACTTTAGCTT TCTCTTCTGG CAATCCGCTG TATGTGTTGA TCTTAAATGG CTTTAAAGGT CTGTATAGCC GAGTCGGTCG TTACTATTTC AGTAGCCCAG AGGCGCGCCA GTTAGCGCTG AACTTCTATA AAGAACTGGA AGTATTAGCC AAAGCTAAAA ATTATGTTGA TGTGCCTGCA TTAATGCGCA CTTACGGTAT CAACAGTGGC AAAATGTGGT TGCAATTGCG TGACGATATG CCGACTTCAA TTGCCCTGCA AGAAGCCAAC TCTTAA
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Protein sequence | MIINAKGPAS FAEKYIVRSI WENKFPPGSI LPAERELSEL IGVTRTTLRE VLQRLARDGW LKIQHGKPTR VNNFWETSGL NILETIADLN PEGFPVLVDQ LLSARTNVSA IYFRGALRNS PDTAVEVLAQ IHQLEDTAES FAEYDYLLHH TLAFSSGNPL YVLILNGFKG LYSRVGRYYF SSPEARQLAL NFYKELEVLA KAKNYVDVPA LMRTYGINSG KMWLQLRDDM PTSIALQEAN S
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