Gene Shewmr4_1517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1517 
Symbol 
ID4252095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1785036 
End bp1785461 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content44% 
IMG OID638118116 
ProductMarR family transcriptional regulator 
Protein accessionYP_733652 
Protein GI113969859 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.446452 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0147514 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCAAA AATTATCTGA CAATGTGTGC TTTGCACTGT ATTCGGCCAC GAACTCATTA 
GTGAGAGCGT TTCGCCCCAT CCTTGACGAA TATGATCTCA CTTATCCCCA GTACATTGTG
ATGCATTCAC TCTGGTACGT GAATGACGTC AGCCTGAAAG AGTTGTCTAA CGACACTCGC
TTAGATCCAA GCACCTTAAC GCCAATCGTG AAGCGTTTGG AATCAAAAGG ATTACTCACT
CGAAATTTAT CAGAACTGGA TGAACGGAAA AAAGTGATAT CACTTACCCT TAAGGGGCGA
CAATTGCAGG ATGAAGCGAC TCAACTCACA GAGAAATTGG TGGCTCGCTC TAGCATGAGT
GCAGAGCGTA TCGAGGAATT ACGACTCTTA TGCCTAGAAT TAGAGGCGGA GTTATCCAAA
GACTAA
 
Protein sequence
MAQKLSDNVC FALYSATNSL VRAFRPILDE YDLTYPQYIV MHSLWYVNDV SLKELSNDTR 
LDPSTLTPIV KRLESKGLLT RNLSELDERK KVISLTLKGR QLQDEATQLT EKLVARSSMS
AERIEELRLL CLELEAELSK D