Gene Shewmr4_1410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1410 
Symbol 
ID4251988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand- 
Start bp1642610 
End bp1643350 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content42% 
IMG OID638118009 
Producthypothetical protein 
Protein accessionYP_733545 
Protein GI113969752 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00489439 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGTCAAAAA ATAAAACAGT ATCAACTACC CTGAGAGATA AAATGATGAA AGGAATTCTA 
ACTGCTGCAG CATTACTGTC TACCATCGGC TTTGTAACAA CTGCCACTGC CATTGAAACA 
ACCCATGAAA ATACAGCCTC TCACGAAGTT GTAACATTTG AAGAAAATAT TAAAGTTGTT 
CAAGAAATTG CAGGCCATCC TGCAGTCAAA TTCAAATCTG TTGAAGTCGC CGGACATCCC 
GCAGTCAAAT TCAAACCATT TGAAGTAGCC GGACATCCAG CAGTCAAATT CAAACCATTT 
GAAGTAGCAG GCCATCCCGC AGTCAAATTC AAACCATTTG AAGTCGCAGG CCATCCCGCA 
GTCAAATTCA AACCATTTGA AGTAGCCGGA CATCCAGCTG TGAAATTTAA ATCAGTTGAA 
GTTGCAGGAC ATCCTGCTGT GAAATTTAAA TCAGTTGAAG TTGCAGGACA TCCTGCAGTC 
AAATTCAAAC CATTTGAAGT CGCGGGACAT CCTGCAGTCA AATTCAAACC ATTTGAAGTC 
GCTGGACATC CTGCTGTCAA ATTCAAACCA TTTGAAGTCG CTGGACATCC TGCAGTCAAA 
TTCAAACCAT TTGAAGTCGC TGGACATCCT GCTGTCAAAT TCAAACCAAT TGAAGTCGCT 
GGCCACCCTG CAGTCAAATT CAAATCTGTT GAAGTCGCTG GTCATCCCTG CGTAAAGTTC 
ATTAACTCTG AAGTTGCATA A
 
Protein sequence
MSKNKTVSTT LRDKMMKGIL TAAALLSTIG FVTTATAIET THENTASHEV VTFEENIKVV 
QEIAGHPAVK FKSVEVAGHP AVKFKPFEVA GHPAVKFKPF EVAGHPAVKF KPFEVAGHPA 
VKFKPFEVAG HPAVKFKSVE VAGHPAVKFK SVEVAGHPAV KFKPFEVAGH PAVKFKPFEV 
AGHPAVKFKP FEVAGHPAVK FKPFEVAGHP AVKFKPIEVA GHPAVKFKSV EVAGHPCVKF 
INSEVA