Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1346 |
Symbol | |
ID | 4251365 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 1560549 |
End bp | 1561178 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638117930 |
Product | hexapaptide repeat-containing transferase |
Protein accession | YP_733481 |
Protein GI | 113969688 |
COG category | [R] General function prediction only |
COG ID | [COG0110] Acetyltransferase (isoleucine patch superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0185286 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGACGC CAATCACAAC GGCCTTGCCT GATTATCAAA GCCAACATAA AAAACGTCTG TCTTGGATGC CCTGGCTGTA TTTTTCCCTC AAAGAAAAAC ACTTACTCTG GGCCAAACCT TGGCAGGATG AAGTGCAAGC CAACCTTTGC GCCCTCGAAA CCGTGACCAT TGGCGAAAAC TGTTTTATTG CGCCCGAGGC ACAGTTATTT GCCGAGCCCA ATCGCGATAT AACAATCGGT AATCGCTGCA TGATTGCCGC TGAATGCTTT TTGCACGGCC CTATCACGCT CGGTGATGAA GTTGCCATCA ATCACGGCTG CTCCTTCGAT GGCGGCCGAG TTGGCATTCA GATTGGCTCC CAAACCCGCA TTGCCAATCA CGTCACTATC TATGCGTTTA ATCATGGTAT GGCGCCCGAT ACGCCTGTTT ATCAACAAGC CTCAAACTCT AAAGGAGTCG TGATAGGTAA AGATGTGTGG ATTGGCGCAC AGGCAGGGAT AGTCGATGGT GTCACCATTG GCGATCATGC GGTGATTGGC ATGGGCTGTA TTGTCACTAA AGATGTTCCC GCATGGGCCA TCGTCGCGGG CAATCCCGCT CGAGTGATTG GCGATAGGCG GGATAAATAA
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Protein sequence | MQTPITTALP DYQSQHKKRL SWMPWLYFSL KEKHLLWAKP WQDEVQANLC ALETVTIGEN CFIAPEAQLF AEPNRDITIG NRCMIAAECF LHGPITLGDE VAINHGCSFD GGRVGIQIGS QTRIANHVTI YAFNHGMAPD TPVYQQASNS KGVVIGKDVW IGAQAGIVDG VTIGDHAVIG MGCIVTKDVP AWAIVAGNPA RVIGDRRDK
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