| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1048 |
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| Symbol | |
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| ID | 4251121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 1223481 |
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| End bp | 1224548 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638117621 |
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| Product | TMAO reductase system periplasmic protein TorT |
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| Protein accession | YP_733185 |
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| Protein GI | 113969392 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02955] TMAO reductase system periplasmic protein TorT |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.785467 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAAAAT TTTGGCAAGC TTTGCTCACA CTCACCACCT TTGGCCTGTT TTGTTTATCG
GCAGCAGGCG CCAACAGCCA AACTTGGCCA TTAGAGCTAC GCCTTCCCTT TAATGCCAAG
ATTCAACAGG CGCAGGCACT TAATTATCAT CCCCTGACTA AAGCACAACA GGCTTGGCGC
ATTTGTGCCT TAGTCCCCCA CCTGAAGGAT GCCTATTGGA TTGGCATCGA CTACGGGTTG
ATCCAACAGG CAAAACGCCT CGGCGTATCG CTTGATCTGT TCGAAGCGGG CAGCTATTAC
CATCAGGATA AACAACTCGA GCAATTAAGC GCCTGCATGA AGGGAGATTA CGACGCGATT
CTGCTTGGCG CCGTGAGTCC CAATCTGCTC GAACAGTTTC CAGAGCCACT AACTAAACCC
GTGCTCGCCC TAGTCAATAA ACTCAATGCA GAGCAAGTGC AGACCCATAT CGGCGTTAAC
TGGTATCAAA TGGGACTTAG TGCGGGCAAT TTTATAAAAG CGGATGCCAA AGCACATACG
CCCACCCAGC AGACCACCTT AGCCCTCTTA GCGGGTCCTG AAAACCTAGG CGGCACTGAT
TTAGTCGAAC AAGGCATTCG CCATGCCCTC GAGGGCAGCA ATGTCAGCAT CAGCGCGATT
CAGCATGCCG ATAACAATCG CAATCTCTAC CGCGATCAAT TACAGATTCT GCTAAAAGCC
CAGCGCCCAG ACTATATTCT CGGCAGTGCG GTGGCGATAG AAGCCGCTGT CAGCACCCTC
AAACAAAAAC AGCTGACGCA AGACATCAAG CTGGTGAGCA GTTACTTATC CCCCGCGATT
CTGCGCGGCT TAAAGCGGCA AAAAGTGGTC TACAGCAATG ATGACTTGGT CGTGTTACAG
GGCAAACTCG CCATCGATGT CACGGTAAAA CAGCTCGAAG GCGCTGCGCC TTTTGGCGAT
ATAGGTCCTG CTATCGTTGA GCGCACGACC TCACAAAATA CCCTATCGGA TCTTAGCTTT
AGTCTCGCCG AAGCGGATTT TTATCCCCTG TATCAAGTGC GCCCGTAG
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| Protein sequence | MGKFWQALLT LTTFGLFCLS AAGANSQTWP LELRLPFNAK IQQAQALNYH PLTKAQQAWR
ICALVPHLKD AYWIGIDYGL IQQAKRLGVS LDLFEAGSYY HQDKQLEQLS ACMKGDYDAI
LLGAVSPNLL EQFPEPLTKP VLALVNKLNA EQVQTHIGVN WYQMGLSAGN FIKADAKAHT
PTQQTTLALL AGPENLGGTD LVEQGIRHAL EGSNVSISAI QHADNNRNLY RDQLQILLKA
QRPDYILGSA VAIEAAVSTL KQKQLTQDIK LVSSYLSPAI LRGLKRQKVV YSNDDLVVLQ
GKLAIDVTVK QLEGAAPFGD IGPAIVERTT SQNTLSDLSF SLAEADFYPL YQVRP
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