| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0620 |
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| Symbol | |
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| ID | 4251517 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 714734 |
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| End bp | 715306 |
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| Gene Length | 573 bp |
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| Protein Length | 190 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638117183 |
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| Product | 2'-5' RNA ligase |
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| Protein accession | YP_732757 |
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| Protein GI | 113968964 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1514] 2'-5' RNA ligase |
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| TIGRFAM ID | [TIGR02258] 2'-5' RNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.5382 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGTTACAAC GACTCTTCCT TGGGTTTGCC CCCACAAGCA TACAGCGGCA ACAACTGCTG
CAATTGCAGC AAAGCTTGGC ACCGCATTTA GCGCCACATG CTAAACCCGT CATCCAAAGC
AATTTACACT TAACCCTCGC CTTTTTAGGA CTCACGAATC CGACTCAAGT GGCGCAGTTG
CTCGACGGTG TCGATAAGCT GGCTAAACCA AGATTCAGTG TCACGCTGGA TAGCATCGCC
GTGTGGCCTA AGGCGCAGGT CTGTTGTTTA AAGGGCGATA GCATCAGTCC TGAGTTAGCC
CTCTTAACAT CTCAGGCACA GGATTTAGCC CAACAGTTAC AGTTGCACCT GAGTGAGCAT
CCGTTTCGGC CCCATATCAG CTTGTTTAGA AAGGCAAAGC CGTCAGGCAT CTTGGCGAGT
GAGCTAACGC TTAAGGAGTT GGTACTGCAG AACGTCATCC AAGCTTCGAT GCTTGAACTC
ACGCTCGCAC CCGAGCAGCT GCATTTGTAT CTTTCCGCCA GTGGCGGACG CGGTGTGGAA
TATCAAATCT TACATTCTTG GCCGCTCGCA TAA
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| Protein sequence | MLQRLFLGFA PTSIQRQQLL QLQQSLAPHL APHAKPVIQS NLHLTLAFLG LTNPTQVAQL
LDGVDKLAKP RFSVTLDSIA VWPKAQVCCL KGDSISPELA LLTSQAQDLA QQLQLHLSEH
PFRPHISLFR KAKPSGILAS ELTLKELVLQ NVIQASMLEL TLAPEQLHLY LSASGGRGVE
YQILHSWPLA
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