| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0428 |
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| Symbol | aceE |
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| ID | 4251902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 475419 |
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| End bp | 478085 |
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| Gene Length | 2667 bp |
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| Protein Length | 888 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638116987 |
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| Product | pyruvate dehydrogenase subunit E1 |
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| Protein accession | YP_732565 |
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| Protein GI | 113968772 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2609] Pyruvate dehydrogenase complex, dehydrogenase (E1) component |
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| TIGRFAM ID | [TIGR00759] pyruvate dehydrogenase E1 component, homodimeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.753679 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGAAG ATATGCTACA AGACTTAGAT CCGTTAGAGA CTCAGGAATG GGTTGACGCC
CTGCAAGCAG TATTAGAACA GGAAGGCCCT GAGCGCGCCC ATTTCTTATT AGAGAAACTG
ATCGATAAAG CCCGTCGCAA TGGCACACAC TTGCCTTACA CTGCGACCAC GGCCTATTTG
AACACTATTC CAGCGGGTCA AGAGCCGCAC ATGCCTGGCA ACCAAGAGAT GGAACGTCGC
ATTCGCGCCA TCATCCGTTG GAACGCCTTA GCTATGGTTC TGCGTGGTTC TAAGAAAGAT
TTAGAGTTAG GCGGCCATAT TTCGAGTTTC GCGTCGAGCG CAACCATTTA TGACGTGTGT
TTCAACCACT TCTTCCGCGC GCCAAACGAG AAAGACGGCG GCGACTTAGT GTATTTCCAA
GGCCATATTG CCCCAGGTAT CTACGCGCGT TCATTCTTGG AAGGCCGTTT AACTGAAGAC
CAACTGGCTA ACTTCCGTCA AGAAGTGGAT GGCAAAGGTT TATCTTCTTA TCCGCACCCT
AAGTTGATGC CTGACTACTG GCAATTCCCA ACGGTTTCGA TGGGCTTAGG TCCAATCCAA
GCGATTTACC AAGCGCGCTT CTTAAAATAC CTGACTGACC GTGGTCTGAA AGATTGTTCT
GATCAAACCG TTTACTGCTT CTTAGGTGAC GGTGAGTGTG ACGAGCCAGA AGCTTTAGGT
GCTATCGGTT TAGCCGCCCG TGAAGAATTA GACAACCTAG TCTTCATCAT CAACTGTAAC
CTGCAACGTC TGGACGGCCC AGTACGCGGT AACGGTAAGA TCATCCAAGA ACTGGAAGGC
GAATTCCGCG GCGCTGGCTG GGAAGTGGTT AAAGTGATTT GGGGTCGTTA CTGGGATCCA
TTATTAGCCC GTGATACCAG CGGTAAGTTA CTGCAGTTAA TGGAAGAAAC CGTTGACGGT
GAATACCAAA ACTGTAAAGC CAAAGGTGGC GCTTATACTC GCGAACACTT CTTCGGCAAA
TATCCAGAAA CCGCCGAAAT GGTAGCGAAC ATGTCAGATG ATGACATTTG GCGCTTAAAC
CGTGGTGGTC ATGACCCAGT TAAAGTTTAC GCGGCATTAG ACCATGCGCG TAAGACTAAA
GGTCGCCCAA CTGTGATCCT AGCGAAAACC GTTAAAGGTT ACGGCCTCGG TGATGCGGGT
GAAGGTAAAA ACATCGCACA CAACGTGAAG AAAATGGGTA TCGAGTCTAT CCGTTACTTC
CGCGATCGTT TCAATATCCC AATTCCAGAC GATCAATTAG AAGATCTGCC GTTCTACCAC
CCAGGTCCAG ATTCGGAAGA AGTGAAGTAC ATGATGAGCC GTCGTGCCGA GCTGCACGGC
AGTGTGCCAC AACGTCGTGA GAAGTTCAGC GAAGAGCTGG AAATTCCATC ACTGAAGATT
TTCGACTCGA TTCTGCAGGG TTCTAACGGC CGTGAAATTT CGTCAACGAT GGCGTTTGTT
CGCGTACTGA CGGCACTGTT AAAAGACAAG AAGATTGGCA AAAACATCGT GCCAATTATT
CCTGACGAAG CGCGTACCTT CGGTATGGAA GGTCTGTTCC GTCAAGTGGG TATTTATGCT
CACGAAGGCC AAAAATACGT TCCGCAAGAC TCTGACCAAG TGGCTTACTA CCGTGAAGAT
AAGTCAGGCC AAGTACTGCA GGAAGGTATT AACGAATTAG GTGCTATGTC ATCTTGGGTA
TCGGCAGCGA CCAGCTACTC AGTGAACGAT GTGCCAATGA TCCCATTCTA CATCTACTAC
TCAATGTTCG GTTTCCAACG TATTGGCGAC ATGGCTTGGG CTGCGGGTGA TATGCGTGCT
CGCGGCTTCT TAGTCGGTGG TACTTCTGGC CGTACAACCT TAAACGGTGA AGGTCTGCAG
CATCAGGACG GTCACAGCCA CGTACTGGCT AACACCATTC CTAACTGTAT TACCTACGAT
CCAACTTACG GTTATGAAAT TGCCGTTGTG GTACAAGATG GTATTCGTCG TATGTACGGC
GAGAATCAAG AAGATATCTT CTACTACCTG ACCACAATGA ACGAAAACTA CGAGCAGCCA
GCCATGCCAG AAGGCGCAGA AGTTGGCATC GTTAAAGGTA TCTACAAGTT AGAAACCGTT
GCCGGCTCGG GTAAAGGCAA AGTTCAGTTA ATGAGCTGTG GCACCATTCT TGAGCAAACA
CGCAAAGCGG CTCAAGCACT GGCAAAAGAC TTCGGTATCA CTGCCGACGT ATTCAGCGTA
ACCAGCTTCA ACGAACTGAC TCGCGATGGT CAAGCGGTTG AGCGTTGGAA CATGCTGCAC
CCAACTGAAA CGCCAAAACA AGCGTATATC AGCCAAGTGA TCTCCAGTGA TGCGCCTGCA
ATCGCAGCGA CTGACTACAT GAAGATCTAC GGTGAGCAGT TACGTGCATA CATGCCAACC
GATTACAAAG TGTTAGGTAC TGACGGTTTC GGTCGTTCAG ACAGCCGTGA CAACCTGCGT
CACCACTTCG AAGTGGACGC TAAGTTCATC GTTATCGCGG CACTGAAGTC ACTGGTTGAT
CGTAAAGAGC TGCCTGTTGA TGTGTTAGCG AATGCCATCA AGGAATACGG CATCGACGCT
GACAAGATCA ATCCACAGTA CGCGTAA
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| Protein sequence | MSEDMLQDLD PLETQEWVDA LQAVLEQEGP ERAHFLLEKL IDKARRNGTH LPYTATTAYL
NTIPAGQEPH MPGNQEMERR IRAIIRWNAL AMVLRGSKKD LELGGHISSF ASSATIYDVC
FNHFFRAPNE KDGGDLVYFQ GHIAPGIYAR SFLEGRLTED QLANFRQEVD GKGLSSYPHP
KLMPDYWQFP TVSMGLGPIQ AIYQARFLKY LTDRGLKDCS DQTVYCFLGD GECDEPEALG
AIGLAAREEL DNLVFIINCN LQRLDGPVRG NGKIIQELEG EFRGAGWEVV KVIWGRYWDP
LLARDTSGKL LQLMEETVDG EYQNCKAKGG AYTREHFFGK YPETAEMVAN MSDDDIWRLN
RGGHDPVKVY AALDHARKTK GRPTVILAKT VKGYGLGDAG EGKNIAHNVK KMGIESIRYF
RDRFNIPIPD DQLEDLPFYH PGPDSEEVKY MMSRRAELHG SVPQRREKFS EELEIPSLKI
FDSILQGSNG REISSTMAFV RVLTALLKDK KIGKNIVPII PDEARTFGME GLFRQVGIYA
HEGQKYVPQD SDQVAYYRED KSGQVLQEGI NELGAMSSWV SAATSYSVND VPMIPFYIYY
SMFGFQRIGD MAWAAGDMRA RGFLVGGTSG RTTLNGEGLQ HQDGHSHVLA NTIPNCITYD
PTYGYEIAVV VQDGIRRMYG ENQEDIFYYL TTMNENYEQP AMPEGAEVGI VKGIYKLETV
AGSGKGKVQL MSCGTILEQT RKAAQALAKD FGITADVFSV TSFNELTRDG QAVERWNMLH
PTETPKQAYI SQVISSDAPA IAATDYMKIY GEQLRAYMPT DYKVLGTDGF GRSDSRDNLR
HHFEVDAKFI VIAALKSLVD RKELPVDVLA NAIKEYGIDA DKINPQYA
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