Gene Shewmr4_0348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0348 
Symbol 
ID4250859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp371707 
End bp372255 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content50% 
IMG OID638116903 
Producthypothetical protein 
Protein accessionYP_732485 
Protein GI113968692 
COG category[S] Function unknown 
COG ID[COG4648] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGTCC TGCTACAAGT ACTAACCGCA CTCGCGCTGA TTGCTTATCC AGTCGCCGTG 
TATTTAGGAC TGAATTATCT GCCAGCAGGC ACCATAGCCC TAGTGCTATG CCTCTTGTTG
GTAGTGCGTT TAATGCTGCA AAAGCAAAAG GTTAAAACCT TAGTTTTGCC TTTGCTTGTG
GGGATTGCGC TCACAGCGGG CAGTTTTGTC GCCAAACGCA GCGACTGGCT GTTGTATTAC
CCCGTGGTGA TAAACCTCAC CATGTTAGCC CTGTTTAGCT ACTCGCTATA CCAAGGCCCG
AGCATGATTG AACGGCTCGC ACGGCTCAAA GAGCCCGACT TGCCGGATGA AGCCATAGGT
TATCTTAAAA AAGTCACCCT GCTTTGGTGT GGCTTATTTA TCCTAAACGG CACTGTGGCG
GCCTATACCG CCGCGTTTAC CAGCCTAGCA ACTTGGACCT TGTATAACGG TTTGATTGCA
TACGTACTCA TGGGACTGCT CCTCGGTGGG GAATGGTTAT ATCGCAGCTT TTGGTTGAAG
AATACATGA
 
Protein sequence
MRVLLQVLTA LALIAYPVAV YLGLNYLPAG TIALVLCLLL VVRLMLQKQK VKTLVLPLLV 
GIALTAGSFV AKRSDWLLYY PVVINLTMLA LFSYSLYQGP SMIERLARLK EPDLPDEAIG
YLKKVTLLWC GLFILNGTVA AYTAAFTSLA TWTLYNGLIA YVLMGLLLGG EWLYRSFWLK
NT