| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0176 |
|---|
| Symbol | |
|---|
| ID | 4250704 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | - |
|---|
| Start bp | 196845 |
|---|
| End bp | 197972 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 638116719 |
|---|
| Product | Delta-9 acyl-phospholipid desaturase |
|---|
| Protein accession | YP_732314 |
|---|
| Protein GI | 113968521 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1398] Fatty-acid desaturase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.482981 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGATAT TGGAAACTAT AATGAATAAA CCCCCTATCA TCTGGCTTAA TGTCACCCTA
TTTAGCCTCA CCTTTCTCAG TGCGATTATC CTCGTTCCTT GGTATGGCCT AGCTCACGGT
TATGGCGCCA GCGAATGGAT TGCTTTTGTC GTGTTAGCCT TTGCAAGTGG TCTGTCGATC
ACAGCGGGTT ACCATAGACT CTGGTCGCAC AAGGCCTATA AAGCTCACCC TGCGGTACGT
TTCCTCTACG CGCTTGGCGG TGCATTAGCA TTACAAAACA GTGCATTACA TTGGGCATCC
GATCATCGTG TGCACCATAA GCATGTCGAT GACAATGATA AAGATCCCTA CTCTGCCAAC
ATGGGTTTCT GGTACAGCCA TATAGGTTGG ATGCTGCGCG AATACCAAGC CCAGCGCTAC
CATGACTACC AAAACGTGCG TGATTTGCAG AACGACCGTA TCGTGATGTG GCAACACAAG
CACTATCTCG CCCTCGTCAT TCTGATGAAC ATTGGTTTGC CTGCGCTACT CGGCTGGTTC
ACTGGTAATA TCGCAGGCAT GTTGCTGATG GCAGGATTAC TGCGCTTAGT CGTTGTGCAT
CACTGTACCT TCTTCATTAA CTCCCTCGCC CACGTGTGGG GTAGCCAACC TTATACCGAT
AAAAACACCG CCCGTGACAA CGGTTTTCTG GCGATGTTGA CCTACGGTGA GGGTTATCAT
AATTTCCACC ATATCTTCGA AAACGATTAC CGTAACGGCA TTAAGTGGTG GCATTACGAT
CCAACTAAGT GGTTGATTAA AGCGTTATCT TGGGTTGGTT TAGCCACAGA CTTACGCACT
AGTCCGCAGG AACGGATTGA GAGTGCGCGT TTACAGATGC AACTGCTTCA TGCCAAAAAC
AAAGTGATTC ATTTACCTAA TGCCGATGAA ATCATTGAGA AAATCCAACA GGAATACGAG
TTAATGAAGG AACATTTACT CGAATACTAT CAGGCGAAAA AGGCGCTGTT AGAAGCCAAG
CGTAAGCAAC TGGTCGATCA ACAGTTGTTA CTGCAAGTCG AAGAATTGAA GACACGATTC
CTGACTCAGC AAAAAAGCTG GAAGAGCCTC ACGGCAAGTT ATAGCTAG
|
|---|
| Protein sequence | MRILETIMNK PPIIWLNVTL FSLTFLSAII LVPWYGLAHG YGASEWIAFV VLAFASGLSI
TAGYHRLWSH KAYKAHPAVR FLYALGGALA LQNSALHWAS DHRVHHKHVD DNDKDPYSAN
MGFWYSHIGW MLREYQAQRY HDYQNVRDLQ NDRIVMWQHK HYLALVILMN IGLPALLGWF
TGNIAGMLLM AGLLRLVVVH HCTFFINSLA HVWGSQPYTD KNTARDNGFL AMLTYGEGYH
NFHHIFENDY RNGIKWWHYD PTKWLIKALS WVGLATDLRT SPQERIESAR LQMQLLHAKN
KVIHLPNADE IIEKIQQEYE LMKEHLLEYY QAKKALLEAK RKQLVDQQLL LQVEELKTRF
LTQQKSWKSL TASYS
|
|---|
| |