| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_4386 |
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| Symbol | |
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| ID | 4476014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008573 |
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| Strand | - |
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| Start bp | 273644 |
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| End bp | 274927 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 639720741 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_863899 |
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| Protein GI | 117676323 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.438421 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAGACT TGCTTTTTAA CGTCAGAACT AAAAAACCGA TTGGCTATCG GTTTTCCTCC
ATTGTGCTAG GAATGTGTTT AGTATTCCCT GCCGTTGCGG TATCGAATGA AGCGCCACAA
ACACTCACCT TAGCCGATGC TGTGACTTTG ACACTTCTGC AACACCCAGA ATTACAGATT
TTCAACTCGC AGCAGCGCGT GATGGAAGGG CGAATACAGC AGGCAAGTGT CGGTGAGCGG
CCTGAAATAG GTTTGATGAT TGAGGATGCT CTGGGTACTG GTGAACACAG TGCTCTGAAA
AGTATGCAAT CTACGCTCAG TTTTTCATGG TTACTGCAAC AAGATTTGAT TGATAGTCGT
GTTAACACGG CTAAAACAGA GGCCACTCAA TTAGATATAG AAAAACAAAT CAAAGCCTTG
GATTTGTCTT CACAGGTGGC TAAACATTTT ATTGATTTGT TAGTGAAGCA AGAACGCCTC
AAGCTCAATC TGATAGCAGA AAAGCAGGCA AAAGAGGTTG TCAAAACCGT TGCTAAACGT
GTGCAAGCGG GAAAGAGTTC TGCGGTTGAA ACACAGTTGG CAAAGGCTGA GCTTATCCGT
CGTGGCTTGG CCGTCGAAGA TATCGAGCAT GAACTCAAAG CCAGCCAATA TCAATTGGCA
TCACAGTGGG GAAAGCCTAA GGCATCCTAT CGTTTCAACG GCAATCTGCT TGATATGCCT
GCTGTGCCAT CAGTTGACAG TCAGCTTAAC TTGTTAAAAA AGCATCCTCG TTTTCAACAG
TTTGCGACTG CGCAACGCAT TGCTCAATCG CAAATGGAGC TCGCACGAAT AGAAGCTAAG
CCGCAGTGGC AAGTGACCGC TGGCGTGAGG CGCTATGAGG CGAGTGATGA TTTTGGCTTA
GTCGCGGGTA TTTCTATCCC TTGGGGTTCA AGTGACCGTA ATGCGGGAAC CATAGCCGCC
TTACAAGCAC AGCAAGATGT ACTCGCCAAT GAGCAAAACG CATTAATGCA GGCTCAGGAT
GCCCAGTTGT ATGTGCTGTT ACAGGAAATG GCACATTCTG CACATGTTAT CGATACAGTG
CGCAGTGACA TAGTGCCAAC CCTTGAAAAA GCTCTGTCTG AGGCAAGCAA TGCCTTTGAT
AAAGGTCTGC TCAGCTACAA CCAATACAAT GACGTGTATC GGGAATTACT CAGTGCTCAA
TATCAGTTGC TGGATGCCTT TGAAAGTTTG CATTTACAAC ACATTGAAAT TCAACGCCTA
ACGGGCACAT CCATTTCTCA GTGA
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| Protein sequence | MRDLLFNVRT KKPIGYRFSS IVLGMCLVFP AVAVSNEAPQ TLTLADAVTL TLLQHPELQI
FNSQQRVMEG RIQQASVGER PEIGLMIEDA LGTGEHSALK SMQSTLSFSW LLQQDLIDSR
VNTAKTEATQ LDIEKQIKAL DLSSQVAKHF IDLLVKQERL KLNLIAEKQA KEVVKTVAKR
VQAGKSSAVE TQLAKAELIR RGLAVEDIEH ELKASQYQLA SQWGKPKASY RFNGNLLDMP
AVPSVDSQLN LLKKHPRFQQ FATAQRIAQS QMELARIEAK PQWQVTAGVR RYEASDDFGL
VAGISIPWGS SDRNAGTIAA LQAQQDVLAN EQNALMQAQD AQLYVLLQEM AHSAHVIDTV
RSDIVPTLEK ALSEASNAFD KGLLSYNQYN DVYRELLSAQ YQLLDAFESL HLQHIEIQRL
TGTSISQ
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