Gene Shewana3_4282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4282 
Symbol 
ID4475936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008573 
Strand
Start bp166549 
End bp167286 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content48% 
IMG OID639720639 
ProductIS4 family transposase 
Protein accessionYP_863797 
Protein GI117676221 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAAAG GTTTGTTTAA TCTCCCCTTG CGAGCACTAG AAGGTTTTCT CAACTCAGTG 
TTTAGTTTGA TGAGTCTGCA ATTAACTTCA CCTGGTTACA GCTGCATCAG CAAGCGGGCA
AAGACAGTCA AAGTTAACTA CCGCCCCCCT TGCCGAGGCG CGATTGCTCA CTTAGTTGTC
GATGCCACAG GACTGAAAGT ATATGGCGAA GGTGAATGGA AAATGCGTAA ACATGGTAAG
GAAAAACGCC GAACTTGGCG TAAGTTGCAC CTTGCGATAG ATGCGGCCAC ACATGAAGTC
ATCGCAGCCG AAGTCAGTTT AGAGAGTGTG GCAGATAGTG AGGTTCTCCC AACGTTATTA
AACCCACTAA GGCGCAAGGT AAAACAAGTG TCAGCTGACG GTGCTTATGA CACCAAAAAA
TGTCATAAGC TGCTGAAACG CAGAGGGTGT AAACCTACGA TACCGCCGCG AAAAAATGCA
GGTTATTGGG AAGAAGGTCA TCCCAGAAAC GAGGCCGTCA GCGCTCTGAA AAGTGATGAA
CTCAAACAAT GGAAACAAGA GAATGACTAT CACCAACGCT CCCTGTCAGA AACAGCTATG
TATCGTTACA AGCAACTGAT TAGCCCGAAA TTGAGCCTGC GGGACTACAA CGGCCAAGTC
GGCGAGGCAC TGGCTGGTGT GAAAGTGATG AACAAAGTCA TAGGACTGGG TATGCCTATT
CGCCAGAGGG TCAATTAA
 
Protein sequence
MLKGLFNLPL RALEGFLNSV FSLMSLQLTS PGYSCISKRA KTVKVNYRPP CRGAIAHLVV 
DATGLKVYGE GEWKMRKHGK EKRRTWRKLH LAIDAATHEV IAAEVSLESV ADSEVLPTLL
NPLRRKVKQV SADGAYDTKK CHKLLKRRGC KPTIPPRKNA GYWEEGHPRN EAVSALKSDE
LKQWKQENDY HQRSLSETAM YRYKQLISPK LSLRDYNGQV GEALAGVKVM NKVIGLGMPI
RQRVN