Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_4252 |
Symbol | |
ID | 4475845 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008573 |
Strand | - |
Start bp | 127520 |
End bp | 129604 |
Gene Length | 2085 bp |
Protein Length | 694 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639720609 |
Product | phage integrase family protein |
Protein accession | YP_863767 |
Protein GI | 117676191 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.000987809 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATTGCTG GAAATAATCG ATTAGCCACA GCCATTGAAA TTGACTTATC CAGAGAACGA TTGCTCTACC TAGCACAGCA TGGACTATGG ACCGAGTTAG AACAGAAAGC GGTATCGTTT AAGCAGAATG GTTCCCCTAT TTCAATATTC AATGACGATG TCTGGAATTT TGCACCATAC AAAGTGGGAA CAGAAATCGC ATTGCTGAAT TTTCAATTTC CAGATGGGGC GATGTACCCC CGATTTGTTC AAGAGCTGAA AGTTGTTGCG CTTGCTTACA TATATCATTC ACGTCACGCC TATCGTATTG GAACTATCAG ATCAAAAATT GCTTGTTTGA AGCGGTTGGC TATCTCACTG TATCAGAATG AAATATTTTC ATTTGATGGA CTTACTATTG AGACACTAAA GAGCCTTACC AAGAAAAATC TGTATAGCCC TCGAGAAGTG GATGTTGGCC CAATTAATAG CCTCAACGAT TTAGGTGATT TTTTACCTTT TGATGTTAAC TTTTTCGAAC GATTAACATT ACAAAAATTA AGGGTAAAAC AACCCTTAAA GGAGCAGCAT CCTGTCATAC CGCTAAGAAT TTATCTAGCA GCATTAAACT CTTATACAAA TGAAGTACAA CTCTGGCATA AATATAAAGA CCAGTTAGAG CAAGCGGTGC AAGCAGTCTT TGAGTATGAG CAAACACAAG CGAATCGCAT GCTCCAGAAC CTACGAAACG GGACGTGCAG TGTTGGTCAA GTTTTTAATA ATGCTGATAA AAAATACTTT AGGTTCATCA ATGAACTGAA GAAACATAGC GTGCCGTTAG TAGATCATGG AGAGTCGGAA CAGTGGGATA TATTATGGAA TCAATGTGAG CCAGTAATTA GAACAGATTT CTACGAGCCA CTTCCTGCCA TAACGATCGG AAACCAGCAA TTTTTTTCTG CTCATGAAAT AAAAGAATTT TGTCGAATAC TCGATAGCAA GTGCCGATAT TTGGTTCTTT GTTTGAGTGG TATGCGTAGT AATGAATTGC TGCAAATCAC CCCAGAATTT GGTGCACAAG TGATCACGTT GGATGGAATT GACATCCATC TTTTCCATAC CAGACAACAG AAAATTACTC TTGGCTACCA AGGGCAGAAT GATGTGTATG TGACGACTCG CAATGGTCAT ATAGCCTATG AATTGCTTAA TGCAATAAAC CGACCTGTCA GATGTTGGCA CCGAGCAAAC GGACGAAAGG AATGGCTGTT AAATTCATTT AAGAACTTTA GAACACCGAA AAGTGTTAAC AGCTCTACCA GAGTTTTACA TTCACTATCT AAACTATTTA CCACCCAGAA AGAAGAGCAG TTGTCTGTAG TATTAAATTC AGATGACATT GAAATGCTCC GTCGTAGTGA TCCAGAAAAG ACATTCAATA TAGGAGAACG GTGGCATCTG ACCCCACATC AGCTCCGGCG GTCTCTAGCT TATTATCTGG TTGGAATGCA GCTCGCCGAT TATCCTCAGT TGAAGCAGCA GTTCAGCCAT TACTCGATAG CGATGACTAT GTATTATGCG CGAAATGCCA GTTCGTTCAG AAAAATGTAT CACGACCTAG AAAAAGAGCG ACTAAGGCAG CAAGCTAAAC TGTATTCTGA TCTAACAACC AAAGTCATGC AGGGGGTAAA ATTAGGTGGA GGTCAGGGTA AGCATATGTT CTCAGAGAAT TTTGTCGACC GAGATATTTC ACCTGCATAC TTTGAGAAAG AGATTAAGTC TGGTAGAAAA CATATTCATG CCATAGCGCC AGGAATGTAC TGTATTAACC ATACATGCAG TATGAGGATT GGCATTGATT TATCTGAGTG TACAGATTGT GACTGGTCGA TCATTGAAAG CGTTGCCTAC GCAAAAGCTG CAAGAAGCGA AAGCATCAAT ATCCTAGAAA CTCTAAAACT TAGGAATGAG TTGTCAGCAG ATATCGCAGC ATTTCACACA GTTCGTATAC GTGCAGCGGA GAAAATCATG GCTGATATGA ATCAAAACTT TGAACCGTAT CAGTCACCAG CAGAAGAATG GCTGATTTCG TCAACGGTGC AATGA
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Protein sequence | MIAGNNRLAT AIEIDLSRER LLYLAQHGLW TELEQKAVSF KQNGSPISIF NDDVWNFAPY KVGTEIALLN FQFPDGAMYP RFVQELKVVA LAYIYHSRHA YRIGTIRSKI ACLKRLAISL YQNEIFSFDG LTIETLKSLT KKNLYSPREV DVGPINSLND LGDFLPFDVN FFERLTLQKL RVKQPLKEQH PVIPLRIYLA ALNSYTNEVQ LWHKYKDQLE QAVQAVFEYE QTQANRMLQN LRNGTCSVGQ VFNNADKKYF RFINELKKHS VPLVDHGESE QWDILWNQCE PVIRTDFYEP LPAITIGNQQ FFSAHEIKEF CRILDSKCRY LVLCLSGMRS NELLQITPEF GAQVITLDGI DIHLFHTRQQ KITLGYQGQN DVYVTTRNGH IAYELLNAIN RPVRCWHRAN GRKEWLLNSF KNFRTPKSVN SSTRVLHSLS KLFTTQKEEQ LSVVLNSDDI EMLRRSDPEK TFNIGERWHL TPHQLRRSLA YYLVGMQLAD YPQLKQQFSH YSIAMTMYYA RNASSFRKMY HDLEKERLRQ QAKLYSDLTT KVMQGVKLGG GQGKHMFSEN FVDRDISPAY FEKEIKSGRK HIHAIAPGMY CINHTCSMRI GIDLSECTDC DWSIIESVAY AKAARSESIN ILETLKLRNE LSADIAAFHT VRIRAAEKIM ADMNQNFEPY QSPAEEWLIS STVQ
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