Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_4250 |
Symbol | |
ID | 4475843 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008573 |
Strand | - |
Start bp | 125137 |
End bp | 126921 |
Gene Length | 1785 bp |
Protein Length | 594 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 639720607 |
Product | KAP P-loop domain-containing protein |
Protein accession | YP_863765 |
Protein GI | 117676189 |
COG category | [R] General function prediction only |
COG ID | [COG4928] Predicted P-loop ATPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000235835 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | TTGTGGTCAG ATACAGAATC CGATAAGGAT TACCTTAATT TTGGAGAAGT CTCACAGCTC GCTGTCGACA TTCTCACCGC AGACGACATG TTACCAGTTT CCATTGGTGT TTTCGGTAAC TGGGGTGCTG GCAAGTCCTC CCTTCTAAAA TTGATAGAGA AAAAACTCCA ACAAGACCAA AAAGACTGGG TTGTTATCAA ATTCGATGCT TGGCTGTATC AAGGCTATGA TGATGCACGA GCAGCCCTCC TTGAGGTTAT TGCTACAGCT CTTACGAAAG CAGCTGATGG AAATGCAGGC CTTGCAACAA AAACTAAAAA TCTCCTCGCT CGAGTCGATG GGTTTAGAGC TATGGGTTTA TTGGCCGAGG GGGCAGCCAT ATTTGCAGGG ATTCCCACTG GAGGTCTGAT TTCTAAAGGT GTTGGTGCCT TACGTAATCT TACTGACGGT ATTCAAGATC AGGATGAATA CGAAAATCTA GTGGGGACAG CTAAAGAAGT AAAGAGCCAG ACAGGCGGCT TACTTAAACC TAAGTCGAAG AAAAGCCCTC CTCAACAGAT TGATGCCTTC CGAAAGGAAT ATGGGGAGAT CTTAGAAGAG TTAGGCAAAC CACTGGTTGT GGTTATAGAT AATCTCGATC GTTGCCTCCC TACCAATGCT ATCAATACCC TTGAGGCCAT CAGGCTGTTC CTCTTCCTAG AAAATACGGC ATTCATTATT GCTGCTGATG AAGAAATGAT CAGAGCCTCT GTAGCAGATT ACTTTAAAGG TGCATCGGAC CGACACCAGA TAGACTACCT AGACAAACTG ATTCAGGTTC CGATTCGAGT CCCTAAAGCT GGTGTGCGAG AGATCCGTTC TTACCTGTTC ATGCTGTATG CAATCGACCT CCGCCTTCCC AAAGATAAGC TCGAAAAACT CCGAGAAGGC TTGGAAAATG CCCTGCAGCA ATCTTGGAAA GACGAACCTA TAACCCGTCA AGATGCACTA ATGCTGACCA GTGAGTCTGA GGATAGCATA TTGGCAAAGG CATTTGCCCG AGCCGACCGG ATAGCGCCAC TTCTGGCTAA CTCACCCATT ATCCACGGGA ACCCCAGGAT CGTAAAACGA TTGCTGAATG TAGTTAAAAT GCGTTCACAA ATTGCACGAC GCCGTACAAT GCCTTTGGAC GAAGCTATCA TCACAAAGCT AGTAATCTTC GAGCGATGTG TAGGCATGAA AGCAACGGCC GATTTCTATC GTTTAGTTGA TTCAGAAAAG GGAACTCCCG AACTTCTTAA ACAGTTGGAA GCAGGTAGTG ATCAGATACC CGCTGATGCC CCAAAGACTT GGACTGACAA TCCAACGACT CAGTCCTTTA TTCTTGAATG GGCCCAACTT GAACCACGCC TCAGTGGTGT CGATTTAAGG GCTGCAATTT ACCTGTCTCG GGAAACCATG CCTATTGGTG CTTATGTAGT CGGACTATCC CCAGTAGGGA GAGAAATCTT AAGTGTTTTA GTTAATACGA AAAATACCAG CTCCCCAACT GCAGAAAAGC TTTTAAGTAC TCTTCCGTTT GAAGAGCAGA TACCTGTGAT GGAAGGGATT ATTAGTCACC TTAGACAGTT TACTGATTGG ACTAAACAGC CGAAGGGATT TGCAGGAGCA TGCCTGCTGG CACGGCACTC AGCCGAAGCA GCCAAAGTTT TCGTTCGATA TTTACAGGAA TTAAATGTGG GAGGTAAACC TCCCGCGTGG ATGGCGGCTT CTCTAACAAC TGAAAAATGG CATAAGGACG CTTAA
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Protein sequence | MWSDTESDKD YLNFGEVSQL AVDILTADDM LPVSIGVFGN WGAGKSSLLK LIEKKLQQDQ KDWVVIKFDA WLYQGYDDAR AALLEVIATA LTKAADGNAG LATKTKNLLA RVDGFRAMGL LAEGAAIFAG IPTGGLISKG VGALRNLTDG IQDQDEYENL VGTAKEVKSQ TGGLLKPKSK KSPPQQIDAF RKEYGEILEE LGKPLVVVID NLDRCLPTNA INTLEAIRLF LFLENTAFII AADEEMIRAS VADYFKGASD RHQIDYLDKL IQVPIRVPKA GVREIRSYLF MLYAIDLRLP KDKLEKLREG LENALQQSWK DEPITRQDAL MLTSESEDSI LAKAFARADR IAPLLANSPI IHGNPRIVKR LLNVVKMRSQ IARRRTMPLD EAIITKLVIF ERCVGMKATA DFYRLVDSEK GTPELLKQLE AGSDQIPADA PKTWTDNPTT QSFILEWAQL EPRLSGVDLR AAIYLSRETM PIGAYVVGLS PVGREILSVL VNTKNTSSPT AEKLLSTLPF EEQIPVMEGI ISHLRQFTDW TKQPKGFAGA CLLARHSAEA AKVFVRYLQE LNVGGKPPAW MAASLTTEKW HKDA
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