| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_4235 |
|---|
| Symbol | |
|---|
| ID | 4475959 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008573 |
|---|
| Strand | - |
|---|
| Start bp | 108768 |
|---|
| End bp | 109001 |
|---|
| Gene Length | 234 bp |
|---|
| Protein Length | 77 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 639720593 |
|---|
| Product | virulence protein VsdF |
|---|
| Protein accession | YP_863751 |
|---|
| Protein GI | 117676175 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.00483154 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACTG AAATGTTAAG AGCAACGAAA GTACGCATTT ATCCAACGCC AGAACAAGCT
GAGTTTTTAA TTGCTCAGTT TGGGGCTGTG CGCTTTGCGT ATAACAAAGC TCTACATTTA
AAGTCTTACA TGTACCGCAA ACATGGTGTC ACATTGAGTC CAAAAAAAGG ATATAAAGCC
ACTGCTTTCG GTTGCAAAGA AATCACGAAA ATATCATTGG TTGAAGCAAT ATGA
|
|---|
| Protein sequence | MSTEMLRATK VRIYPTPEQA EFLIAQFGAV RFAYNKALHL KSYMYRKHGV TLSPKKGYKA
TAFGCKEITK ISLVEAI
|
|---|
| |