Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_4184 |
Symbol | |
ID | 4475890 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008573 |
Strand | - |
Start bp | 49642 |
End bp | 50745 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639720542 |
Product | IS605 family transposase OrfB |
Protein accession | YP_863700 |
Protein GI | 117676124 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0675] Transposase and inactivated derivatives |
TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.90515 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.53705 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAGAGA TCGCTATTAA ACAACGCTTT TACCCAACGA CTGAACAGGC TCAATTGCTT GCGCAGACTT TCGGCTGTGT GCGTTTCGTT TACAACGCGA TCCTTAAATG GCGTACCGAC GCTTTCTACA ACGAAAGCAA AAAGGTTAAC TACAACACGG CAAGCTCTAA GCTGACCGAA CTCAAGAAGC AAACTGAGTT TGAATGGCTT AACAGCGTGT CGTGTGTACC GCTCCAACAA TCTTTGCGCC ATCAACAAAC TGCGTTTAAG AACTTCTTTG AAGGAAGGGC GAAGTATCCA GCCTTTAAGA AGAAGTGCAG CAAGCAAAGC GCAGAATTCA CGAAGTCGGC GTTTAAGTTC AAAGATGGCA ATATCTACAT TGCCAAGTCC AAACAGCCGC TTGATATTCG CTGGTCGCGT GAACTTCCTA GCGAACCAAC TACCGTCACT ATCTCGAAAG ACAGTGCAGG CCGCTACTTC GTGTCTATGC TTTGCCGCTT CGAGCCTAAA CCACTGCCTG TTACCAAAAA GACAACGGGT ATTGATTTGG GTTTGACCGA CCTTGTGATT ACCGCTGACG GGTTTAAATC TGGCAATCCC CGCCATACTG CAAAGTACGA GAAGAAATTG GCTCAGGCGC AACGCCGCCT TTCCAAGAAG AAGAAAGGAA CTGCCAACTT CCACAAAGCC AGAATCAAAG TTGCTCGCAT TCAGGCGAAG ATTGCCGACT GCCGCCGCGA CTTTACCCAC AAACTCACCA CTACGTTGAT AAACGAAAAC CAAGTGATTA GCTGTGAGAG TTTGAGCGTT AAAAACATGG TCAAGAATCC GCGACTTGCT AAGGCCATTG GTGACGCCAA TTGGGGCGAA ATGGTTAGGC ATCTTGAGTA CAAAGCAGAA TGGCGCGGCA GAACACTTGT CCAGATTGAC AAGTGGTATC CGTCTAGTAA GCGTTGTAAT TGCTGTGGTC ACGTAGTTGA TTCTCTACCG TTACATATAA GGCATTGGAC TTGTCCAGCG TGTGAAGCGC GCTTAGACCG TGATACCAAT GCCGCTATTA ATATCAAAGC CGCTGGGCAA GCGGTGTTAG CTTGTGGAGC GTAA
|
Protein sequence | MKEIAIKQRF YPTTEQAQLL AQTFGCVRFV YNAILKWRTD AFYNESKKVN YNTASSKLTE LKKQTEFEWL NSVSCVPLQQ SLRHQQTAFK NFFEGRAKYP AFKKKCSKQS AEFTKSAFKF KDGNIYIAKS KQPLDIRWSR ELPSEPTTVT ISKDSAGRYF VSMLCRFEPK PLPVTKKTTG IDLGLTDLVI TADGFKSGNP RHTAKYEKKL AQAQRRLSKK KKGTANFHKA RIKVARIQAK IADCRRDFTH KLTTTLINEN QVISCESLSV KNMVKNPRLA KAIGDANWGE MVRHLEYKAE WRGRTLVQID KWYPSSKRCN CCGHVVDSLP LHIRHWTCPA CEARLDRDTN AAINIKAAGQ AVLACGA
|
| |