| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_4147 |
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| Symbol | |
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| ID | 4475923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008573 |
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| Strand | - |
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| Start bp | 6556 |
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| End bp | 7779 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 639720505 |
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| Product | outer membrane porin |
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| Protein accession | YP_863663 |
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| Protein GI | 117676087 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.17719 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAATA AAAAACTATC CGTATTAGCG CTAGGTTTAA TTTGCAGCAC TTCAGCTTTT
GCAAATGAAA CAGCTTCCAG CTTTGATAAG TGGTTCTCAG AAGGAAGTGT TCATGGTGCG
ATGAAATCAT ATTACTTTGC TCAAACATTT GATAAGGAGG GCAGCCACGA CAGCCAAATC
TGGGCGAATG GTGGCAACAT TGCTTTTAAT ACTGCTGAAC TTAATGGGTT TGAACTCGGA
GGTGAGTTCC AAGGATCCTA TATAAACAGC CGGAATGACC GAGATGGAAA AACAGCGGGC
AATATGGACG CTGATGGCGC CATTTTGTCT GAATCATACT TGAAGTACAC CTTGGGGGAT
ACAATCTTCA AAGGGGGAAG ACAACATTTT TCATCTCCTT TTGTCGCCGA TTCTGATTCG
AGGCTCATCA AGGAGTCGTT TGAAATGTAT CAGATCCGCA ATAAGAGTCT ATTAAACACT
GAGATTTCAG CAGGATATGT AACTAAATAT CAAACGCGAA CAGACAAATC ATATTACGCA
GATAATGACT TTGTTGAGTT TGAACAAAAC GGAACAGGTC GTCCGGGGGA GTTTTATGAT
ATTGGTGACA GCGGCATGTG GTTTGCGCAG GTTAATACAT CGCCATCAAA AAAAATTAAA
ATTCAGGCCT CATATGCTGA TGTCATTGGT GAGGTGAAAG CATTATACGC TGATGTGAAA
TACACGTTAC CCATCCCGTT AAAAAGCTAT ATTGCGGCAC AGTTCTATAC TAATTCTTGG
GATAACCCTG ACTTCGCCAA TAATAACTTA TTTGGTATTA AATTTGGCGC AAATCATAAC
AACTTTGAAT TTTTTGCTGC ATATACAACA GTGAGTGGTT CAGAAGGAGA GCATCGTGTC
TTTAGAGGCA TTGGACAAGG TGCGTATTAT CAATTTACCA CAACCACAAA AACAGCTGGT
GTTAACGCCT TCGAGGCTGG AACTGACTCA TATCAGCTCG GTGTTGGATA TAAATACAAT
CAATTGGATG GGAAATTAAG ATTCACTTCG TTTAATAACC CAGAAGTAGG TAAAGACCTT
GATGAATGGA CATTAAACTT GGTTTATGGT TTTTCCGGTG ATTTTAAAAA CTGCCTTGTT
TCAGTTGACT TTTCAGTGTT GGACTATGAG AACAATGATA ATGATGCTAC CGATTTAAGG
GCTAAGTTTA TTTATAAGTT TTAA
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| Protein sequence | MSNKKLSVLA LGLICSTSAF ANETASSFDK WFSEGSVHGA MKSYYFAQTF DKEGSHDSQI
WANGGNIAFN TAELNGFELG GEFQGSYINS RNDRDGKTAG NMDADGAILS ESYLKYTLGD
TIFKGGRQHF SSPFVADSDS RLIKESFEMY QIRNKSLLNT EISAGYVTKY QTRTDKSYYA
DNDFVEFEQN GTGRPGEFYD IGDSGMWFAQ VNTSPSKKIK IQASYADVIG EVKALYADVK
YTLPIPLKSY IAAQFYTNSW DNPDFANNNL FGIKFGANHN NFEFFAAYTT VSGSEGEHRV
FRGIGQGAYY QFTTTTKTAG VNAFEAGTDS YQLGVGYKYN QLDGKLRFTS FNNPEVGKDL
DEWTLNLVYG FSGDFKNCLV SVDFSVLDYE NNDNDATDLR AKFIYKF
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