Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_4119 |
Symbol | |
ID | 4480333 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 4943969 |
End bp | 4944982 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639728734 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_871742 |
Protein GI | 117922550 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2267] Lysophospholipase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAAA CGCCCCTAAA CTTTCCAAGG GAAGAGTTTT CCAAGGTAGC TTTTTCAACG GAACACGATT TAAATACTTC TGAACAGCAA GCCTTCTGGC AAACCGTTGT CCAAGACACT CTCAAAACGC CCGATGGATT AACCTTGGCC TACATGATGG TCAAGCATCC CAAGGCCCAT GCCAGCATAG TCATCAGCAG CGGTCGGGTT GAATCCTACT TAAAGTATCA AGAATTGGTA TTTGATTTGT ACCAGCAAGG CTATTCGGTA TTTGCCATCG ATCACCGCGG CCAGGGATTA TCGAGCCGCA TGACGGCCAA TCCCCATCAA GGCCATGTGC GGCGGTTCAA CGACTATATC GACGACTTTG CCCTGTTTAT GCAAACCGTT GTGCTCAAAC ATGCCACTTC GCCACTGTTC TTGCTCGGGC ATTCTATGGG CGGCGCCATC GGTACCTTGT ATCTCAAACA ACATCCGGAT GTGTTTACGG CGGCGGCATT TTCAGCTCCC ATGTATGGCA TTAAGTTACC TATGCCGAAA GGGTTTGTCC GTTGGCTTGC GAGTAAGCTC GATGCCAGTC TCAACGGCGG AGAGCCTAAC TATGTCCTCA GCGGGCAAAA CTATAAGGCC GCTCCTTTTA AGGGAAATGA TCTCACCCAC TGCCAGAGCC GTTATCAAGC CTACCGAGAG TTGTACGATG CGGCGCCGAA GCTGCAATTA GGCTCACCGA CTAACCGCTG GTTGACTGAA TCCTTAGATG CGGCCGATGC CTGTGTTTTG GCCACGGCAC ATATCCGCAC GCCCATTCTG ATCCTGCAAG CCAGTGAGGA TAAGATTGTC GACAATGCCG CCCAAAATCT GGCGGTAAGC TCAAATTGCC AATTAAAAGT GATTGCAGGG GCAGCCCATG AGATTTTTAT GGAGAAAGAT AGCTACCGTA ATCAAGCGCT TAATTACGCA CTCGACTTTT TTAAACGCTA CGCAACAAGG GACGTGGACA AACAAGCTGT TTAA
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Protein sequence | MSQTPLNFPR EEFSKVAFST EHDLNTSEQQ AFWQTVVQDT LKTPDGLTLA YMMVKHPKAH ASIVISSGRV ESYLKYQELV FDLYQQGYSV FAIDHRGQGL SSRMTANPHQ GHVRRFNDYI DDFALFMQTV VLKHATSPLF LLGHSMGGAI GTLYLKQHPD VFTAAAFSAP MYGIKLPMPK GFVRWLASKL DASLNGGEPN YVLSGQNYKA APFKGNDLTH CQSRYQAYRE LYDAAPKLQL GSPTNRWLTE SLDAADACVL ATAHIRTPIL ILQASEDKIV DNAAQNLAVS SNCQLKVIAG AAHEIFMEKD SYRNQALNYA LDFFKRYATR DVDKQAV
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