Gene Shewana3_3795 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3795 
Symbol 
ID4480005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4561118 
End bp4561792 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content40% 
IMG OID639728408 
ProductHNH endonuclease 
Protein accessionYP_871419 
Protein GI117922227 
COG category[V] Defense mechanisms 
COG ID[COG3183] Predicted restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.952639 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCAAT GGAAAAGGAC TAAAGCCGTT AAAGGTCAAA AACCGCTCTA CACATTTGAA 
GAAATTAGTG ATTCAACACT GCGGGTAACT CGTGATAATG ATGGGGAAAT TTTTGTTAGA
GACTTCTCTA TTGGGGACCG CTTCATTACA TACGCCAAAC TCAAAGTTGA AATGGAGTCT
TTGAACCCTA ACGGTGGTAG CGAGGAAAGC GGTTACTACT TAATTGTGAG AGAAGTTACC
TCAAGTGGCA CAGGAAAGAA AACCGACGTC AGCGCACAAA ACCAAATCGA CAAACTATAT
TTTGGGCAAG TAGATAACGA GGAATTCAAA TCTCCACAAG AAGTAGATGA TGGCGAAGTG
TATACAGAAG GTTCAGTTAA GCGAGTACTT GTAAATAAAT ACGAAAGAGA CGCTAAGGCA
AGAAAAGCTT GTATTGCGCA CCATGGGTGT CAGTGTAAAG TTTGCGGGTT CAACTTTTCA
GAAACATATG GCTTGCACGG TGAAGGTTTT ATTGAGGTAC ATCATATAAC ACCGCTCAGT
ACAATAAGTA AAAGCTATCA AGTCGATCCA ATTAACGACC TAATTCCTGT TTGCTCGAAT
TGTCACTCTA TGCTCCATCG CGGAAAAGAG CCATTAAGTA TCGATGAGCT AACAAAGTTA
GCAGATAAAA ATTAG
 
Protein sequence
MLQWKRTKAV KGQKPLYTFE EISDSTLRVT RDNDGEIFVR DFSIGDRFIT YAKLKVEMES 
LNPNGGSEES GYYLIVREVT SSGTGKKTDV SAQNQIDKLY FGQVDNEEFK SPQEVDDGEV
YTEGSVKRVL VNKYERDAKA RKACIAHHGC QCKVCGFNFS ETYGLHGEGF IEVHHITPLS
TISKSYQVDP INDLIPVCSN CHSMLHRGKE PLSIDELTKL ADKN