| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3046 |
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| Symbol | |
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| ID | 4478309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 3651019 |
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| End bp | 3651930 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 639727650 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_870677 |
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| Protein GI | 117921485 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000304897 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.295225 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAATT TACCTAGCCT TAAGAATTTA TTCTATTTGG TGAACCTTCA CCAAGAGCAG
AATTTTAACC GCGCCGCTAA GGTGTGTTTT GTCAGTCAAT CAACGCTGTC GAGCGGGATC
CAGAATCTTG AAGAACAGCT TGGCCATCAA TTGATTGAAC GTGATCATAA ATCCTTTATG
TTCACCGCTA TAGGTGAAGA AGTGGTGCAG CGTTCCCGCA AAATCCTGAC AGATGTGGAT
GATTTAGTCG AACTGGTGAA AAACCAGGGC GAACCTATGA CTGGGGATAT CCGCTTAGGT
TGTATTCCAA CCATTGCGCC ATTTTTATTA AGCCGTGTGG TTAAGCAATG TCAGCAAGCT
TATCCGGCGA TGAGTTTGTT ACTCAAAGAA GATACCACTG AGCGTTTGCT CGATGCCTTA
GGTAAAGGGG AGTTGGACTT ACTTATCCTC GCCTTGCCCG TGGATACCAG TGGTTACCAT
AGCATGAAAG TCGGGATAGA CCCCTTTAAG ATGGTGATCC ATAAAGACTT AGTGGGTGGC
ATTCATCAGC CTATCGATTA TCAGACCTTG CCCGATGAGA GTATCTTCCT GCTGCAGAGT
GAGCACTGCA TTACAGGGCA TGCAATTACC GCTTGTCAGT TAGGTGACAG CGCGAAAGTG
AATCCCTTTG CCGCGACCAG TCTGCACACT TTAGTGCAAA TGGTGGATAG CAAGTTGGGC
ACTACCTTCT TACCGCAAAT GGCGATCGAT GCTGGCATCT TAAATGATAC CGATCTAGTG
GTGATGACTC CGCCAGGTGA AGCGCCTTAC CGTGATATCG GCTTAGTTTG GCGACAAACA
ACCAGCCGGA TTTTGACCTT CCGTACCTTA GGTTTGCTTA TTCAAAAGCT ATTAACCAAA
GAAATCGAAT AA
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| Protein sequence | MKNLPSLKNL FYLVNLHQEQ NFNRAAKVCF VSQSTLSSGI QNLEEQLGHQ LIERDHKSFM
FTAIGEEVVQ RSRKILTDVD DLVELVKNQG EPMTGDIRLG CIPTIAPFLL SRVVKQCQQA
YPAMSLLLKE DTTERLLDAL GKGELDLLIL ALPVDTSGYH SMKVGIDPFK MVIHKDLVGG
IHQPIDYQTL PDESIFLLQS EHCITGHAIT ACQLGDSAKV NPFAATSLHT LVQMVDSKLG
TTFLPQMAID AGILNDTDLV VMTPPGEAPY RDIGLVWRQT TSRILTFRTL GLLIQKLLTK
EIE
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