Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2959 |
Symbol | |
ID | 4478167 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 3552383 |
End bp | 3553984 |
Gene Length | 1602 bp |
Protein Length | 533 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 639727564 |
Product | hypothetical protein |
Protein accession | YP_870591 |
Protein GI | 117921399 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTCG ATAAATTACA CATTCGTTCT CGATTTAAAA ATTTGGAAAA CGTAAAGGTG GACTTTGATG AAGACCACCT GATGACTGTG GTGGTGGGGC GCAACGGTTC GGGTAAATCC AACGTGCTGG AAGCGTTAGT AGCGATATTT AGGAACCTTG ATTTAGGCGA AGAACCACCG TTTTCATATG AGTTGATTTA TCGACTTGGC GAGCCTCGCA AACCAAATCA GCCCAGCGAA CGATGGCTGG AAATCACTAT TGATGCCGAT CCGACTCGTG GCACTACCGC TAAGCAATAT CAAGTACAGG TGCGAGACTT GTTGGAAGAA GACGCATCTG AAGACATGTT TGGCAAGACT GCATCAGGAA ATATCGTTCC GTTTTCAAAG GTGAAACGCG ATAAGGAAGG GAAAGCACCA TATTTGCCAA ACTATGTATT TGCTTACTAT TCTGGCCCCA GTGATCGCTT AGAGAATCAC TTTAAGAAAC ATCGCACCGA TTTTTACCGT CGTCTGCTTA AAGATGAGTT GGATTTAAAG GGCGATATTC GCCCGCTGTT CTATGCTAAA CCCCACCATA GTCAATTTGT ACTATTGGCT TTTTTCTTAT CAGAGCAAGA CAGCGCAGAA AAAGCGTTCT TGCGCGAGCA CTTAGGCATT GAAGGTTTAG ACAGTATTCA CTTCGTGATG CGACAACCCG GTTGGGCAAA ACAAAAGGGT GAATTGTTTT GGGGTGCGCG GGGCGTTGTT CGCCGCTTTT TGGACGAGCT AATTAAACAC ACGTTGTCAC CGGTTAAGGT AACGCGCCAA GAAGATACCT CTTTGACTGG TAGTAATATT CGTAATGAGT TCTTTCACCT ATTCTTGCCC GATGTAAACG CATTACGTGA GTTTGCCAAA GATCTCAGCC CTGATGAGTT GTTTAAAATG CTCGAAAGTA CGCTGCTTTC AGAAATCATC TCAGAAGTTA GTATTCGGGT GAATGTGACT AGCAGTAAAG ACCCTCTCAC CTTCCGAGAA CTCAGTGAAG GTGAGCAACA GCTTCTCACC GTATTGGGTC TGCTCAAATT TACTGGTGGC AAAGACTCCC TATTTTTACT TGATGAGCCT GACACGCATC TCAATCCCTC ATGGGCAGTG AAGTATCTGA AGTTCCTCCG CGATTTCGTA CCAAACCATG AAACTAGCCA TTTGCTGATG GTAACACATC ATCCACTTGC TATTGCTGAG CTGAAAAAAG AGCAAGTTCA AGTGATGAAA CGAAACGGTG ATCAGCAAAT TGTCGCTAAG ATGCCTGCTG AAAACCCACG GGGTATGGGG ATAAATTTGA TACTGCGCAG TGATATGTTT GGTCTTCAAA CCACGTTGGA TGATGATACT AATCAGAAAC TCAGTAATAG AAATGCTCTC GCCGCCAAAG ATTCTTTATC TAAAGAAGAA GTAGTGCGTG AAAATGGATT TCCTGCAGAG AATGAAGAGC AGTATCTAGC CAGACTTAAC TCGGAGCTTG GGCAATTAGG CTTCAATTTG GCGACAGATG ATCCGGATTA TCTGGAGTTT CTTCGCAACA AGTACCACGC CAATCAGGAG GCCGGTCATT AA
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Protein sequence | MKVDKLHIRS RFKNLENVKV DFDEDHLMTV VVGRNGSGKS NVLEALVAIF RNLDLGEEPP FSYELIYRLG EPRKPNQPSE RWLEITIDAD PTRGTTAKQY QVQVRDLLEE DASEDMFGKT ASGNIVPFSK VKRDKEGKAP YLPNYVFAYY SGPSDRLENH FKKHRTDFYR RLLKDELDLK GDIRPLFYAK PHHSQFVLLA FFLSEQDSAE KAFLREHLGI EGLDSIHFVM RQPGWAKQKG ELFWGARGVV RRFLDELIKH TLSPVKVTRQ EDTSLTGSNI RNEFFHLFLP DVNALREFAK DLSPDELFKM LESTLLSEII SEVSIRVNVT SSKDPLTFRE LSEGEQQLLT VLGLLKFTGG KDSLFLLDEP DTHLNPSWAV KYLKFLRDFV PNHETSHLLM VTHHPLAIAE LKKEQVQVMK RNGDQQIVAK MPAENPRGMG INLILRSDMF GLQTTLDDDT NQKLSNRNAL AAKDSLSKEE VVRENGFPAE NEEQYLARLN SELGQLGFNL ATDDPDYLEF LRNKYHANQE AGH
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