Gene Shewana3_2957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2957 
Symbol 
ID4478165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3550768 
End bp3551529 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content43% 
IMG OID639727562 
ProductHNH endonuclease 
Protein accessionYP_870589 
Protein GI117921397 
COG category[V] Defense mechanisms 
COG ID[COG3183] Predicted restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCAATA GTATAACTCC GCAACAATTC GAACCTGCAT TTGATATTGC TAAGGCTATG 
CGCGAAGGGC GTTTAGATAC ATCTCAAGCT CTTGAACGAA TGGTTGAAAA TGGCTTTAGT
CATAGTTCTG CAACCATGTA CCTGAACGCA CTTATGGCGA TGCCAGTTGG AAAGGTATAT
CAAAAAACCA TTAATAACCC AGCAGCTCGC TATTATCTGC AGAGATTTAT GAGCGAGATG
ACTGCGACTG AATTTGCGAC TGTATTATTG TCAGTCACGA GGCATATACA TTACTACAAT
GCACAAGGAG CGGGTAAACA TCGGCAATTG GCCACCATCC TAGCGGAGTT TCAATCTCTA
GCTAAAGTAC ATTACGGTCA AAACTTTAAC CCTACACTAC TACCTTCTGA GATTAGTGAA
GCCGAAACCG GATTTGTATT TCATGAAGGC GCGATGAAAA CCATTGAGCT TAGTGTGCAT
GAGCGAGAAC CTGCTGCACG AAGAGCTTGT ATTGAGCATT ATGGTGTTTC TTGCCACGTG
TGTGGATTCG ATTTTGAGCA TGCCTATGGT GATATAGGAA AAGGTTTCAT TCATGTTCAC
CATAGAGTTG ATTTAGCTTT AGTTTCAAAT CGCAGAGAAG TTAACCCTAT TGAAGATCTG
ATCCCCGTAT GCCCTAACTG CCATGCTATG CTGCATACTG AAACGCCCGC GATGGCGGTC
GATAAACTCA AAGAATTGCT TAAACAGAAT CTTCAAGGAT GA
 
Protein sequence
MVNSITPQQF EPAFDIAKAM REGRLDTSQA LERMVENGFS HSSATMYLNA LMAMPVGKVY 
QKTINNPAAR YYLQRFMSEM TATEFATVLL SVTRHIHYYN AQGAGKHRQL ATILAEFQSL
AKVHYGQNFN PTLLPSEISE AETGFVFHEG AMKTIELSVH EREPAARRAC IEHYGVSCHV
CGFDFEHAYG DIGKGFIHVH HRVDLALVSN RREVNPIEDL IPVCPNCHAM LHTETPAMAV
DKLKELLKQN LQG