Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2327 |
Symbol | |
ID | 4478084 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 2803958 |
End bp | 2804908 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 639726922 |
Product | transcriptional regulator |
Protein accession | YP_869962 |
Protein GI | 117920770 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.223293 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.02817 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGTAC CAACTGTCGC TTTGATTCTC TACCCTCATT TCAGCGTGTT TCATGTCGCT GTGCCTCAAG CCGTTTTTTC GATGCAGCCA GATGGCAAAT CCATTTTTAA CTTAAAGATA GTGTCAATTG ATGGTAAGCC ACAACACACT GACAATCGGA TGACAGTTCA GCCTGATGGT GGATTAGAAC TCGTTGAGTT GGCAGATATA GTCGTCATTC CAGGGTGGCA TGACCTAGAC AGTGCGCCTA CTTCTAATAT TTCTGAAGCA TTGGTTAGAG CTCATGCAAG AGGAGCTATG GTCGTGGGGC TTTGCTATGG TGCTTACGCA TTAGCCTACT CAGGGCTATT AGATGAAAAA GAAGCTGCTA CTCATTGGAT GGCAGAGGAC GATTTTACTG TTCGTTTTCC AAATATAAAG CTAAATACGA ACGCACTTTA TGTTGAAAGC GACCGTGTAG TCACGTCTGC AGGTACAGCC GCTGCTTTAG ACTGCTGCTT GTATATTGTG AGGTCTTTTT ATGGGACAAA AACAGCGAAT AAAGTTGCGC GCATCTTGGT TGTACCACCA CACAGAGAAG GCGGTCAGGC ACAATTTATT GCACAACCTA TCCCAAAATC AACTCAAGAT GCAGAGGTCA ATAGGTTACT GGATTATTTA CGTGAAAACC TCGACAAACA ATATTCCATC GCTGATTTAG CAGATCAATT ATTTATGAGT CGTCGTACCT TTACTCGGCA TTTCAACAAC GCTACCGGTA TGTCATTTGG AAAATGGCTT GTAAGCACTC GTCTGCAACG TAGCCTTGAG CTTCTTGAAA GTACAAGACT TTCTGTAGAA CAAGTGTCTG AAATGGTTGG TTTTCAGACT GCAACGTCAT TTAGGAAACA TTTTAATCAA CGTTTTCACG TTAGCCCAAG TGCTTGGCGT AAAACATTTA CGGGAAACTA A
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Protein sequence | MQVPTVALIL YPHFSVFHVA VPQAVFSMQP DGKSIFNLKI VSIDGKPQHT DNRMTVQPDG GLELVELADI VVIPGWHDLD SAPTSNISEA LVRAHARGAM VVGLCYGAYA LAYSGLLDEK EAATHWMAED DFTVRFPNIK LNTNALYVES DRVVTSAGTA AALDCCLYIV RSFYGTKTAN KVARILVVPP HREGGQAQFI AQPIPKSTQD AEVNRLLDYL RENLDKQYSI ADLADQLFMS RRTFTRHFNN ATGMSFGKWL VSTRLQRSLE LLESTRLSVE QVSEMVGFQT ATSFRKHFNQ RFHVSPSAWR KTFTGN
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