| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2307 |
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| Symbol | ddl |
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| ID | 4478064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 2772189 |
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| End bp | 2773199 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 639726902 |
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| Product | D-alanyl-alanine synthetase A |
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| Protein accession | YP_869942 |
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| Protein GI | 117920750 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0685707 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCAAAAA TCAATTTACT TTTGCTGTGC GGCGGTGGAA GTGCGGAACA CGATATTTCC
CTACTGTCGG CTAATTATTT TGAAACCTCA TTAGCAAAAT CCGAGCAGTT TAATGTACTG
CGCGTGGTAC TGGATAAATT TGGCCAATAC CAAACCGCCG CAGGCGATGA CTGTGAACTG
ACCAATAACC GCGAAATTCG CTTCCGTGAT GAGACCAAGC CCGCATGGCC TGTGGATTAT
GTCATTCCTT GTATTCACGG CTATCCGGGG GAAACGGGCG ACATTCAGTC TTACTTTAAT
CTTATCCAAC TGCCCTACTT TGGTTGCGAA TCCGAAGCCA GCAGCAACTG CTTTAACAAG
ATCACCGCTA AGATGTGGTT CAGCGCCTTA GGCATTCCTA ACACACCTTA TATCTTCTTA
AATCAATACG ATGATGACGC GATTGCCCAA ACCCAAGCAG CGCTCGAAAA CTGGGGGTCG
ATTTTCGTTA AAGCCGCATC CCAAGGCTCA TCGGTCGGTT GCTATAAAGT CGATGACAGC
AGCAAAGTGG CTGACGTGTT AAAAGATGCC TTTGGCTACG CGCCCTATGT GATCGTCGAG
AAAACCATTA AGGCCCGTGA GCTGGAAGTC GCGGTCTATG AGTATCAAGG CGAAGTGGTT
GCGACCCTGC CGGGCGAAAT CATCTGTGAT AGCAATACCT TCTACACCTT CGATGAGAAA
TACGCCAAGA GCAGTAAGGC ACGCACCGAT GTGGTCGCGC AAAATGTGCC AACTGACATT
AGTGAGCAGA TCCGCGCCTA TGCGATTAAA GCCTTTAAGG GCATGAAGCT GCGCCATCTG
TCACGCATCG ACTTTTTCTT AACCCAAGAT AATGAAATTC TACTCAACGA AATCAATACC
TTCCCGGGTT CGACGCCGAT TTCAATGTTC CCTAAGATGT TGCAAAACCA TGGTCATGAT
TTTACCGAAT ACTTAAGTTT GGTGATTAAC GGCCAGTTAG CGGCTAAGTG A
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| Protein sequence | MSKINLLLLC GGGSAEHDIS LLSANYFETS LAKSEQFNVL RVVLDKFGQY QTAAGDDCEL
TNNREIRFRD ETKPAWPVDY VIPCIHGYPG ETGDIQSYFN LIQLPYFGCE SEASSNCFNK
ITAKMWFSAL GIPNTPYIFL NQYDDDAIAQ TQAALENWGS IFVKAASQGS SVGCYKVDDS
SKVADVLKDA FGYAPYVIVE KTIKARELEV AVYEYQGEVV ATLPGEIICD SNTFYTFDEK
YAKSSKARTD VVAQNVPTDI SEQIRAYAIK AFKGMKLRHL SRIDFFLTQD NEILLNEINT
FPGSTPISMF PKMLQNHGHD FTEYLSLVIN GQLAAK
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