Gene Shewana3_2218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2218 
Symbol 
ID4478614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2664764 
End bp2666878 
Gene Length2115 bp 
Protein Length704 aa 
Translation table11 
GC content49% 
IMG OID639726813 
ProductCheA signal transduction histidine kinases 
Protein accessionYP_869853 
Protein GI117920661 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0643] Chemotaxis protein histidine kinase and related kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCATTA ATATGGCAGA GTTCCATCAG GTTTTTTTTG AAGAAAGCCA CGAACATCTT 
GAAAATATGG AGCAATTGCT CCTTGCATTA GATTTAGCCG CCCCCGATCC CGAAGAACTA
AATACCATCT TCCGTGCCGC CCATTCGATT AAAGGGGGCA GTGGAATCTT TGGTTTTACC
GCGCTGACCA GTGTGACTCA CGTAATGGAG AATTTGCTCG ATAAAACCCG AAAGGGCACG
TTTGAGCTGT CATCCTCCGT CATTGATCTC TTGCTTCGTA CCGTCGATAC CCTGTCGCAT
ATTTTAAATC TCTATCGAGA GGAAGAACCT ATCGATTGGC AACAGGTGGA GTTTGCTAAA
AACCAGTTAG TGGCGGCGTT AAATGGTGAG CCGTTTTCGA CCCAGGCGGC CAAGGTTGTC
GAGACCGCTA ACCAAGAGAA ACCTGCTGCG GTATCAACCA ATTCGGCATC ACAAGAAGAT
GCGAGTTTTG GTTTTTTTGA AGATGAAGTC GAGCTGGGGC TGGTCGATGA AACGGAACAT
TTCGGCTTTT TTGACGAGGC TTATACCGCA AAGGAAATCC GCGTCGAGGA TATTCATTCA
AACGCTGCAG ATTCCGCAAC CCATGCTGCT GTGAGTGACG ATGAATTAGG TTACGGCTTT
TTTGAATCAC TGACAGCAGA GAGTTTTGCA AATGAGTTGG ACGCGTTATC AACACCGATT
CAGAATGTGC AAGTAACTGA TAAGCCGGTA TATAAAACCT TGGTTGAACA ATCTGACGCC
AAAACGGCTC GTTCAAAAAA GCCGCCTAAA GACAGCGCCC AACTTAAATC TCAAGCGACT
ACGGATGTAA AACTGGAGGC GCAAACCCAT TTAGCTTCAT CCCCTGCGAT GAATACGACA
TCAGCAACAC CAGCTGCCTC TAGCCAAGTG GCGAAAAAGG CGAGCACATC GACTCAAGAT
GCCACCTTGA GGGTGGAAAC CTCCAAGATA GATACCTTAG TTAATCTGGC GGGTGAATTG
GTGATCACCC AATCCATGCT CACTCTTATA GGCAATGAAC TGGGCGGTGA ATTAGGTGAG
CGGCTTAAAA CCGCGCTCAA TGAGTTAGAG CGCAATACCC GGGAAATGCA GGAAGCCGTG
ATGTCGGTGC GCATGTTACC CGTGTCGTTC GTGTTTAACC GTTTCCATCG TTTGGTGCGG
GATTTGTCGG AGCAGCTTGG CAAAAATGTC ACTCTGGTGA TTGAAGGCGG TAACACTGAA
ATTGATAAGG GAATGATCGA AAAGTTGGTC GACCCTTTGA CCCATCTCGT ACGCAACAGT
CTAGACCATG GTATTGAAAA GCCAGAAAAA AGAGTCGCGG CAGGTAAAAG TGAGGTCGGT
GTGTTGTCCC TTAAGGCGAG TCAGCGTGGC GGCAGTATAG TGATCGCCGT TCACGATGAT
GGCGGCGGTT TAAACCGCGA GCGCATTTTG CAAAAGGCCC GGGAAAATGG CATGGCACTG
CCTGAGAACA TGACGGACAA GCAAGTATGG CAATTGATCT TTGCCGCGGG GTTCTCAACG
GCCGCTGAGG TCACCGATGT CTCTGGTCGC GGCGTGGGTA TGGATGTGGT GCGCAAGAAT
ATTGAGGCCT TAGGCGGTCG CATCGATATT GATTCCGTTG CGGGCGAGGG CGCGACCTTC
GAAATCCAGC TTCCTCTTAC CTTAGCCATA GTCGATGGCA TGAGTGTCAG CGTGGGCAAT
CAAATCTATA TCTTGCCCTT AGTGCACATT ATTGAATCGA TACAGCCACA AACCGAGCAG
CTTAAATTTT TGGCTAAAGA GCGGTTACTC AGGGTGCGGG AAGAATATTT ACCCCTGCTA
AACCTCTATC AATTAATGGA AATAGAACCC CAAGCCAAGA CGCCAGAAGC CGGCATAGTG
GTCTTGCTCG AAAGCAATAA TAAACGCTTT GGCCTGTGTG TCGATGCACT CGTCGGGCAG
CAACAAGTGG TGATCAAGAG CCTTGAAAAA CACTATCGGC GGATCCCCGG TGTATCGGGG
GCGACCATCA TGGGCGATGG CAGCGTGGCC TTGATCCTCG ATGTTGAATC ACTTGCACTG
CATATCAAAA ATTAA
 
Protein sequence
MSINMAEFHQ VFFEESHEHL ENMEQLLLAL DLAAPDPEEL NTIFRAAHSI KGGSGIFGFT 
ALTSVTHVME NLLDKTRKGT FELSSSVIDL LLRTVDTLSH ILNLYREEEP IDWQQVEFAK
NQLVAALNGE PFSTQAAKVV ETANQEKPAA VSTNSASQED ASFGFFEDEV ELGLVDETEH
FGFFDEAYTA KEIRVEDIHS NAADSATHAA VSDDELGYGF FESLTAESFA NELDALSTPI
QNVQVTDKPV YKTLVEQSDA KTARSKKPPK DSAQLKSQAT TDVKLEAQTH LASSPAMNTT
SATPAASSQV AKKASTSTQD ATLRVETSKI DTLVNLAGEL VITQSMLTLI GNELGGELGE
RLKTALNELE RNTREMQEAV MSVRMLPVSF VFNRFHRLVR DLSEQLGKNV TLVIEGGNTE
IDKGMIEKLV DPLTHLVRNS LDHGIEKPEK RVAAGKSEVG VLSLKASQRG GSIVIAVHDD
GGGLNRERIL QKARENGMAL PENMTDKQVW QLIFAAGFST AAEVTDVSGR GVGMDVVRKN
IEALGGRIDI DSVAGEGATF EIQLPLTLAI VDGMSVSVGN QIYILPLVHI IESIQPQTEQ
LKFLAKERLL RVREEYLPLL NLYQLMEIEP QAKTPEAGIV VLLESNNKRF GLCVDALVGQ
QQVVIKSLEK HYRRIPGVSG ATIMGDGSVA LILDVESLAL HIKN