Gene Shewana3_2215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2215 
Symbol 
ID4478611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2661427 
End bp2662257 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content49% 
IMG OID639726810 
ProductMCP methyltransferase, CheR-type 
Protein accessionYP_869850 
Protein GI117920658 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG1352] Methylase of chemotaxis methyl-accepting proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.556164 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCGAAC ATCAACCTCT AGGGAAAGAG TTTGTTTTTA CGGCGGCGCA CTTTAATACG 
GTGAAGACAC GGCTGTATCA ATTTGCCGGG ATTAAGTTAG CCGACAGTAA AGACGCTATG
GTGTACAGCC GCTTAGTCCG GCGGATCAGG GCGCTGAAGT TAGCGGGATT TACCGCGTAT
TTCGAGTATT TGCAGGCAAA CGAGGGTGAG CACCAGGAGT TTATTAATGC GCTGACCACT
AACCAGACGG CATTCTTTCG CGAGCCGCAT CACTTTGAGA TTTTAAGGCA ATATTTGCAG
GCTCATCCGC ACACCAAAAG GATCTGGTGT GCGGCCAGCA GTACTGGGGA AGAGCCTTAT
TCGATTGCCA TGGTGGTTGC GGAGCATTTT GGCCGTTTTA ACACTCCCAT CGAAATCGTC
GCCTCCGATA TCGACAGTCG GGTGTTATAC AAGGCGCAAA CGGGGATTTA CCCCATCGAG
CGTATCGAGG CGGTGAGTGC CGAGCGCAAG AAGGCGTTTT TTCAGCGTGG ACGTGGGGCA
CAACAAGGCA ATGTGCGCGT GGTCCCTGAA CTTAAACAGA TGTTGCATTT TACGCGGCTT
AATTTGGTCG ATGAGTTTTG GTCAATCAAG ACGCCCATCG ATGTGATTTT TTGTCGCAAT
GTCATGATTT ATTTCGATAA AATAACGCAG GAAAGCATTC TTAAACATAT GATGCTTTCC
CTTGCCGACG ATGGTCTCTA CATCGCTGGC CATTCGGAGA ACTTTAATAT GTTCCCCCAG
ATCATTAAGC CCGTGGGCCA AACAACCTAC AAGGCGGTAA AGGGAGCTTG A
 
Protein sequence
MSEHQPLGKE FVFTAAHFNT VKTRLYQFAG IKLADSKDAM VYSRLVRRIR ALKLAGFTAY 
FEYLQANEGE HQEFINALTT NQTAFFREPH HFEILRQYLQ AHPHTKRIWC AASSTGEEPY
SIAMVVAEHF GRFNTPIEIV ASDIDSRVLY KAQTGIYPIE RIEAVSAERK KAFFQRGRGA
QQGNVRVVPE LKQMLHFTRL NLVDEFWSIK TPIDVIFCRN VMIYFDKITQ ESILKHMMLS
LADDGLYIAG HSENFNMFPQ IIKPVGQTTY KAVKGA