Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2094 |
Symbol | |
ID | 4479502 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 2513971 |
End bp | 2514882 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 639726679 |
Product | hypothetical protein |
Protein accession | YP_869730 |
Protein GI | 117920538 |
COG category | [K] Transcription |
COG ID | [COG2378] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00100358 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTATAGTC TGTATACATT AACATGTAGC AAAAACAGGC ATTACATGGT TACCGCTGAC GTTAAATGGG AGCAGCTTCT TAGATTTCGA CTCATTGAAA TCGTTGCCCT TTGGGAAGGC AGGCTCACAA CCAATCATCT TTGCAATTCA TTCAACATCG GGCGGCAGCA AGCATCGAGA GACATTGCTA ACTATCAGAA GCTTTTCGAA ATACCTCCGC TTGTTCATGA CCGGGGGATT AAAGGCTATA GACCCACTAA TGACTTTAAA CCACGTTTTA CGCAGGGAAC GCCAAACGAG TACCTGTCTC TATTAAACAA ATACACTAAC GAAAATATTG ATGGTTTTGA CCTTCAAGGG CTAGGGCAAG CAAACTCGAT CGTGCTCAGT GTACCTGACC GCCATGTTGC ACCAATTATC GTTAGGCGTT TGCTTCAAGC AGCAAGAGAG CAGCGATGTG TTGATGTTGA CTATGTTTCG TTAGAGCACC CTTCTGAGCG AGGAAGAAAC ATTGCACCGC ACACCCTTGT TTTCGATGGT TTTAGATGGC ACGTACGAGC TTACTGTGAA GAGAAGAAGG GATTTCGAGA CTTTGTTCTA AGCCGATTCA GGAATGAACC TGAAATCCTC GATAAGTCTT CTTTGACCAA AGAAGATGAT GACGATTGGA ACATCGAAGA AACTTTCGAA ATCACAACGA ACCCCTTTCT TACTCAAGAA CAGCAACTGG TTGTAAAAGC AGACTATGGG ATGCTTGAAG CACAGTTTTT CGTATCTTGC AGAAGAGCTT TGATTAAGTA TTACGTAAAA CGCCTAAACA TATGCCTTGA CACAAAAAAG CTGAAATCTT CACCTCAAGC TAACCAGCTC ACGGTCGCTC AGCCACATAG TTTAAAACGG TGGATCTTGT GA
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Protein sequence | MYSLYTLTCS KNRHYMVTAD VKWEQLLRFR LIEIVALWEG RLTTNHLCNS FNIGRQQASR DIANYQKLFE IPPLVHDRGI KGYRPTNDFK PRFTQGTPNE YLSLLNKYTN ENIDGFDLQG LGQANSIVLS VPDRHVAPII VRRLLQAARE QRCVDVDYVS LEHPSERGRN IAPHTLVFDG FRWHVRAYCE EKKGFRDFVL SRFRNEPEIL DKSSLTKEDD DDWNIEETFE ITTNPFLTQE QQLVVKADYG MLEAQFFVSC RRALIKYYVK RLNICLDTKK LKSSPQANQL TVAQPHSLKR WIL
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