| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2038 |
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| Symbol | |
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| ID | 4476403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 2440874 |
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| End bp | 2447236 |
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| Gene Length | 6363 bp |
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| Protein Length | 2120 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 639726621 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_869675 |
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| Protein GI | 117920483 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1205] Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.104871 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTAAAA AAAGCATTTC CCTAACCAAT TTGTATACAG CAATTTCATC AGTGTCTGTC
GATGCGGTTC TCAACCAATT AAATTTCAGG CATGACAGTT TGCGAGCTTA TCTACGCTCA
GTCCTCTCTA GTCAAATGCG CCACAATGAT GGATTTTTAG CAGAGCCAGT AATTGAAGCA
ACATTTGGTT GGCATTCATC TGAGCGATCC TTGAACGATT TGACTAAGCA GGGAGAGTTA
TCAGCACGGT TGGTAAAGTG TATGGATGGT GCTTTTGCGC CAGATACGGA AAAACAAAAG
TCTGAAGATT CAAAAATGGG AAAATCCCGT CTTGGATACG CGACAGACAT AGATGAAGAC
TATACCTGGC CCGAAAATAG AGCTCCTTAT ACTCATCAGT TAGAGGCGTG GAATCTCCTC
TCACAGGACA CTCCGCGTTC TACAGTTGTT ACTTCAGGGA CCGGTTCAGG AAAGACTGAA
TGCTTTTTGG TTCCATTACT TAATGATTTA GCCAAACAAG TTGAATCTCA CGATGAAGTA
CTAGTTGGGG TTCAAGCAAT AATGTTGTAT CCCCTTAATG CATTAATTAA TTCTCAGCAA
GAGCGTTTAA GTGCATGGAC TAGGGGATTT GAGGGAAAGA TAAGGTATGC ACTTTACACT
GGCGAAACTA AACATACTGC ACCACCCAAA GCGACCAGAG TTTTTAAAAC ACACAAGCCT
GAAAAAGTCG AGTATAGGGA TGATATAAGA AATGCACCTC CCCCAATATT GGTAACTAAC
TCAACAATAC TTGAGTACAT GCTTGTTCGC CCAGTTGATC GTGAAATCTT AACAAAGTCT
CAAGGGAAGC TGCGCTGGAT TATCTTAGAT GAGGCTCATA CCTTGGTTGG GACGCAGGCA
GCAGAAATAT CGCTGTTGTT ACGTCGGACG ATGATAGCTT TTAATGTAAA ACCTGAGCAC
GTAAGATTTA TTGCAACTTC AGCAACCATC GGTGACTCAA AAGATTGGAT TAGAACAGAG
AAGTTACTCA AAGAATTCCT CTCTGGGCTT GCCGGAGTGA GCCCTGAACA AGTATCTGTG
GTGCGTGGTA CTCGATACAT TCCTAAAATT CCCGACGACA CTGATATTGA AGGCAAAATT
TCAATTCCGG ATTTAGAAAA ATTAAATAGT GCAGATGCAT ACCAAAAGCT CTGCCAAATC
CCTCTAATGC GCATTTTACG CCAAAGACTA ATTCAATCTC CTATGACAGT TAGCGAGATT
GCAAAAACGG TATATACAGA ACGGGAGCAA TTAGAGGCCC TGCACGCACA AAATGCTATG
AAGTTAATTG ATATTGCAAC AAATGCATAC CCTGACGGCA ATCCAAGTCT TGAGCCTTTT
TTTCCTGTTA GAGCTCACAT ATTTCATCGC GCCCAAAGAG GCTTATGGGC GTGTGTTAAC
CCCAATTGTT GTCATAAGAC GGGGAGTGAG CTAGAGCAGG GATGGCCATT CGGAAGAGTG
TTTGTTTCAG AGCGACAAAA GTGCTTGGAT GGCTGCAGTT CACCAGTGTA CGAATTAACG
CATTGTGCAG TCTGTAAAGA ACCTTCTCTT GCGGCCTCAT TGGTCATTGA CTCACATGGA
AATCGAGTTT TGCTATCACG AGAGCATGAT GATTTAGATG AGTATTCGGA TGAGATTGAA
GATAATCAAG AAATCGATGT AATTCTTGAG CATAAGACTC GCAACAATGT GCAAATATTT
AGCTCCCAAT CGAGCGATTT AGAACGATAT AAATCCTTCG GAAGCTCAGT CGAAGCTTAT
CTGGATCTGA GTACCAGAAG AGTCAAAACT CGTTCTGAAA ACACCCTTGC GGTTAGGTAC
ACAACAGCGG ATCGTGACTC ATATCTCCGT TGCGCATGCT GTGACGCTAC GGAAGCAGTA
GCAAGTTCGA CTTTTAAGAG AGCTCTTCTT GGTGCGCCTT TTTTAATGGG AAATCTTGTC
CCCGAGTTAT TGCGGCATAT CCCAAGGAAA AATGATGATT CGTTGTTCGG TGCTCGTTTA
ATAACTTTTA CGGATAGCCG ACAAGGAACG GCAAGATTTT CTGCAAAGTT GCAACTAGAT
TCTGAGCGTA AGTGGTGTCG TTCAAAAATC TATCGCGAAA TTGCAATGCG AAGCTCTGAT
TCCGAACTGT ATAACGACCC CCAAATTGCA ACATTCAACA AGATTCTTGA TAGTAATCCT
GAAGCCGCTA CTAAGGATTT TATTTTATCG CAGATAAAAA TAAGGCTTGA AGAGTTAAAG
AAAGTCTCAT TCAAATTGAA TTGGGTAGCT GCGGTTGAAC TCTTGGCAAA CACTGACGAA
ATAAGGTTGA TGGCAGGGGA CCTAGATGTC GAAGACTACA TGCTCCCAGG CGAATATAGT
AATCGAGACC AACGCTTAGA AAATACTAAA CACCTTGCAG AATTGTTTTT ACTCCGAGAG
TTTGCGCGGC GGCCTAAAAA TGCCAACAAC TTAGAAACAT TAGGCTTGGT GAAGATAGTT
TACCCTGCCC TAGATTCCAT AACTGAGGAA GATCTGCGAG TTGGCTGTCG GGAATGGGGC
ACTCTAGGTC TCAATCTCGA TGATTGGAAG AGCTACCTAA AGATCATTCT TGATTTTTAT
GTCAGAGAAA ACACGCTAAT TGACATTCAC TCTTATCAAG TGAATTGGAT GGGCGGTAAA
TTATTTGCAC GCCTTCTGCA GGGGCCTGAG TTTGAAGGCA AATCCGAGGA AGAGAAAAAA
GCTATTTGGG CTTTTCCATC GGTGAACAAG GGGAACCAAC ATAAGCTGGT TCGTATGCTC
GAGTTATTTA GCAAAAGGTC AGCTAAAGAC AACCCAGAGC TTTTCAACGG AATCCTCAGA
TTTGCGTGGC GTACTCTAAT TAATAAAGAA ATACTGCAGC ATTACAAGGA TGGAAATAAA
GAGTGGCGTG AAGGCTACCA CCTAAAGCTG AGTAACTCAG CATCCTTTGA ATTGATAACA
AATGCATCCG TGTGTCCAAT TACTAACCGA TGGTTAGATA CGTCATTTCG GGGAATATCG
CCATATTTAA CCAGTAAGAC TGAAATAGAA GATTGCTTGG TTAAGAATAC GAACTGCAAG
ATTCCTCATC CAGCCCCTGA TTTGTTGCAA AGCAATAGCT CGCAATCGCT TCGCAACTGG
ATACGCCACA ATGAGTTTAT TCTTAACATG AAAAAGCAGG GGATCTGGAG AGATATCACT
GATGCGGCAC TTTTACCCCC AGTCATGCTT CGTTCTGCAG AACACTCAGC TCAACAATAC
ACTGACAATT TGAAGCTTTT TGAAAAGGCA TTTAAAAAAG ATTTTTTGAA TGTCCTTAAT
TGTTCAACAA CGATGGAAAT GGGTGTAGAT ATTGGTTCGC TAGTCATGGT AGCGATGAAC
AATGCTCCGC CATCGACGGC AAATTACCTG CAACGCGCTG GACGCGCTGG CCGACGAGGT
GAGAGTACCT CTATCGTATT CACGTTCTGT AAATCTACGC CGCATGGTGA AAGAATTTTT
GCAAACCCGA AGTGGCCATT TGAAACGCCC ATTCCAGTTC CGAAGGTTGC ACTTGAAAGT
GTGACTATTG TTCATAGGCA CATTAACGCA TTCCTCCTAT CTCGCTATCT AAATACCAAG
TTTAGCAAAG AGAATCTGCC AACTTTGAAG TCTGGAAAAT TCTTCACTTC GGATACAGGT
ACTGCAATTT ATGAGCGTTT TATGAGCTGG TTATCCAGTG AAGCTGTTGA TGATAAATAC
ATTAGCCAGT GCTTGCGCAT GATGATTGTA GGGAGTGGAT TGGCGGGACA AGCGGAAGCA
TCTCTTGTGC ATAAAACATT GCAAACCATC GAAGAAGCGT CAAGCCATTG GCGGAGGCGT
TGGGACTCAC TTTGTGCAGA AATTCAGAAA GTAAGCGAAG ACGACACCGG AGCCAAAAGG
CGTTTGATTA AACAGAAAGA ATCTATGGAG AAAGATTCGC TATTGAGTGA ACTAACCTCA
AGAGGATTTC TTCCAGGCTA TGGTTTCCCG GTAAACGTTG TTGAACTGGT TACTAACAAT
AAAATGGAAA AAGCAAAGGA GGCTCACAGC TACCCATCAA GGGGACTGGC CACAGCGATA
AGGGAGTTCT CTCCAGGGAG TGATATCGTT TTAAACGGTG CCGTATATCG TTCGATGGGC
CTTCAATTGT CTTGGAAAGT GCCACAAAGC CAGTATGACC TATCTAAGGT TCAGAAATTG
CGGAATGCTG TGAGCTGCCA AGAATGCGGC TTTTGTCAAT TGGACATTAT AAGCAATCAA
GAGCTAAAAA GTTGTCCAGA CTGCGGTTCC AATAGGCTCA AGACGATGGA GTATATCGTA
CCCGATGGAT TTAAAGTCGA TTATAAGACG CCACTTCATA ACGATTACAC TCAACCACTT
TATGCGCCAT ATACAGAACC GTTAATTTCC ATAACAGACA CAACCTGGCA GGCGCTATGT
CGGCACGAAT TAGGACGCTT TAAGGTCTCC GACGCGGCAG AGCTTTTTTA CTACAACAAT
GGCAATGGTG GTGGGTATGC TCTCTGTTGG AGTTGTGGCC GGATGGAGCC ATTGGCAGTC
AATAGTAGTG AAGGTCGTAC TTTTTTAGAT CTGAAAAGTC AGGTGAGATT ACTTACTCGA
GAAAAGCATC CTAGGTTGTC TGGTACGTCA ATAGATGGAA ATGCTGACTG TATTAAGAGT
GATTGGAGCA TTAAAGTCAG TTCTTCAAGT TTACAAGATG GATTATTACA AATTCCTTTT
GTTCTCGGGT TCAGCAGTGT AACAAGTATG TTCGAGCTAC AAATTAGGGA TCCAAAAACT
CACGAGTGGA TATTTGATCG TAAGCTCTTG TTTAGTTTCG GTGCTGCCTT AAGACAAGTT
TATTGTGCAA GGAAGGGGAT TTCCACGTCT GAGCTTGGCA TTTCAGTCCA TCAAAGGAAA
ACAGCATCTT CCGAGAGTGA ATCAGTTTGT AGCCTTTTTA TTTTCGATAC TGCAGAACAA
GGTGCAGGGT ATGCATCGTC AATCCCTGAG GTATTGGCAG AGCTTTTTAA AGATGTCTAT
GAGTACGCGT CAGAATGTCC ATCTGCTTGT GATGCATATT GTCACGCATG CCTTTTGGAT
TATGACACAC AGCATCATGT CGAGTATTTG GACCGAAAAT GGTTAGTTCA GTTTTTTGAA
GAAACAAAGT TTCATTTGTT ATTTGAGGTT GAACCTTCTC GAGCATGCTT TGGAGAACGC
TCAATTCCTG AGCTCAGCAG TATTGACCAG CTACTATCAA TCAAGGGTAG GTCGTCATTA
GGAATAGATT TGTTTGTGTC TGCTTCTGAT TGGGATCTAG CTGAAGTTTC AGTTTTATCT
AAACTTCATG ATTTGAAAGG GATACCAATT CGTTTGCTGT TAGGTAATGC GGCGATTCAA
ACACTGACAC CAAATTTAGC TTGGCAGCTT AGGTCTAAAA TTCCATCTCA AGTGGAGATC
TCATCTTATG AATTACCCAA GGAGATTTCG GCCGGCTCGT TCCCGTTATT ACGAATGAAA
TTTACCGATG GTGATTATTG GTATGCAACC GATGATCAGA GAAAAATCTC TTGTAACGCT
CAATGGGGCT CGTCGGAAGG AGCATCTTTA GTCGCGGCAA AACCAATGGC TGTTGATCTA
AAAACCAGCC CTTTCAACTT GGAAGACTTG GCATTGAAGT CTGAGCTAAC AAGTAACATC
GCGCTGATCG ACGACATTAC GACAAAGCTG AATGTCCCAT TCAATCGATT TGGCAGTTCG
ATATTTGCGC TTTTCGAGGA GATAATACCG CGCTTCAAGA ATGTGTTTGA TCAAGGCATC
GAGAATGTAA CTTATACAGA CAGATACCTG ATAAGCCCAA TAAGTTTAGG CTTGATCATC
TCTATTTTTG CTCATGTTAA AGCAATTATG GGGATAAGGG ATTTTGAGAT CATTACATGC
CATCCGAGCG CTGCTGGTGA TAGGAAACCA TACTGCATTG CGGATAACTT CAGCAATATT
GATGAAGTTA ATGATTTCAT CGACTCGGTT TGTAGTACAT ACGGAATTAA CGTATATCCA
GAGTTTGCTT CCAAAAATGA CATCGATCAT GGAAGGTGCT TGACGTTTAC ACTCAAGAAT
GGAGAGGTGG TTCGATTTTT ATTTGACCAA GGAATGGGGT ATTGGGCAAC TCGCCGTCCA
TACAGTCGGA TCAAATTTGA TTTCGAAAGT GTGGGGGCGT TTGATATTAA TTCTTGGTGT
TTTAAAGTTG AGTCAAGTGG TGGCAATAGC TACATTGTTG TACATAAAGG GCGGAGCTGT
TAA
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| Protein sequence | MSKKSISLTN LYTAISSVSV DAVLNQLNFR HDSLRAYLRS VLSSQMRHND GFLAEPVIEA
TFGWHSSERS LNDLTKQGEL SARLVKCMDG AFAPDTEKQK SEDSKMGKSR LGYATDIDED
YTWPENRAPY THQLEAWNLL SQDTPRSTVV TSGTGSGKTE CFLVPLLNDL AKQVESHDEV
LVGVQAIMLY PLNALINSQQ ERLSAWTRGF EGKIRYALYT GETKHTAPPK ATRVFKTHKP
EKVEYRDDIR NAPPPILVTN STILEYMLVR PVDREILTKS QGKLRWIILD EAHTLVGTQA
AEISLLLRRT MIAFNVKPEH VRFIATSATI GDSKDWIRTE KLLKEFLSGL AGVSPEQVSV
VRGTRYIPKI PDDTDIEGKI SIPDLEKLNS ADAYQKLCQI PLMRILRQRL IQSPMTVSEI
AKTVYTEREQ LEALHAQNAM KLIDIATNAY PDGNPSLEPF FPVRAHIFHR AQRGLWACVN
PNCCHKTGSE LEQGWPFGRV FVSERQKCLD GCSSPVYELT HCAVCKEPSL AASLVIDSHG
NRVLLSREHD DLDEYSDEIE DNQEIDVILE HKTRNNVQIF SSQSSDLERY KSFGSSVEAY
LDLSTRRVKT RSENTLAVRY TTADRDSYLR CACCDATEAV ASSTFKRALL GAPFLMGNLV
PELLRHIPRK NDDSLFGARL ITFTDSRQGT ARFSAKLQLD SERKWCRSKI YREIAMRSSD
SELYNDPQIA TFNKILDSNP EAATKDFILS QIKIRLEELK KVSFKLNWVA AVELLANTDE
IRLMAGDLDV EDYMLPGEYS NRDQRLENTK HLAELFLLRE FARRPKNANN LETLGLVKIV
YPALDSITEE DLRVGCREWG TLGLNLDDWK SYLKIILDFY VRENTLIDIH SYQVNWMGGK
LFARLLQGPE FEGKSEEEKK AIWAFPSVNK GNQHKLVRML ELFSKRSAKD NPELFNGILR
FAWRTLINKE ILQHYKDGNK EWREGYHLKL SNSASFELIT NASVCPITNR WLDTSFRGIS
PYLTSKTEIE DCLVKNTNCK IPHPAPDLLQ SNSSQSLRNW IRHNEFILNM KKQGIWRDIT
DAALLPPVML RSAEHSAQQY TDNLKLFEKA FKKDFLNVLN CSTTMEMGVD IGSLVMVAMN
NAPPSTANYL QRAGRAGRRG ESTSIVFTFC KSTPHGERIF ANPKWPFETP IPVPKVALES
VTIVHRHINA FLLSRYLNTK FSKENLPTLK SGKFFTSDTG TAIYERFMSW LSSEAVDDKY
ISQCLRMMIV GSGLAGQAEA SLVHKTLQTI EEASSHWRRR WDSLCAEIQK VSEDDTGAKR
RLIKQKESME KDSLLSELTS RGFLPGYGFP VNVVELVTNN KMEKAKEAHS YPSRGLATAI
REFSPGSDIV LNGAVYRSMG LQLSWKVPQS QYDLSKVQKL RNAVSCQECG FCQLDIISNQ
ELKSCPDCGS NRLKTMEYIV PDGFKVDYKT PLHNDYTQPL YAPYTEPLIS ITDTTWQALC
RHELGRFKVS DAAELFYYNN GNGGGYALCW SCGRMEPLAV NSSEGRTFLD LKSQVRLLTR
EKHPRLSGTS IDGNADCIKS DWSIKVSSSS LQDGLLQIPF VLGFSSVTSM FELQIRDPKT
HEWIFDRKLL FSFGAALRQV YCARKGISTS ELGISVHQRK TASSESESVC SLFIFDTAEQ
GAGYASSIPE VLAELFKDVY EYASECPSAC DAYCHACLLD YDTQHHVEYL DRKWLVQFFE
ETKFHLLFEV EPSRACFGER SIPELSSIDQ LLSIKGRSSL GIDLFVSASD WDLAEVSVLS
KLHDLKGIPI RLLLGNAAIQ TLTPNLAWQL RSKIPSQVEI SSYELPKEIS AGSFPLLRMK
FTDGDYWYAT DDQRKISCNA QWGSSEGASL VAAKPMAVDL KTSPFNLEDL ALKSELTSNI
ALIDDITTKL NVPFNRFGSS IFALFEEIIP RFKNVFDQGI ENVTYTDRYL ISPISLGLII
SIFAHVKAIM GIRDFEIITC HPSAAGDRKP YCIADNFSNI DEVNDFIDSV CSTYGINVYP
EFASKNDIDH GRCLTFTLKN GEVVRFLFDQ GMGYWATRRP YSRIKFDFES VGAFDINSWC
FKVESSGGNS YIVVHKGRSC
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