Gene Shewana3_1945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1945 
Symbol 
ID4479742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2312635 
End bp2313834 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content48% 
IMG OID639726527 
Producthypothetical protein 
Protein accessionYP_869582 
Protein GI117920390 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCAGG ATCTGAAAAT CACCCACACA CCACAACCGA AACACAAACT CACACTATCC 
ATTGCGCTTT TTAGCGGTTT AACCTTCTTT ACCGCGCAGA GTGCTTTCGC CAATTCGCAA
AGCACGCTCC TAAGTCACGC TGGGCTTGAG AACTCACAAA ACTTTCTCAA GCCAAACACC
ACGGATAAAA CAGAATTAAG CCAAAGCGAC GTTGCGCAGC TTATTCAACA CAACCTTGAA
ACCCATCTCT ATACACTCCC ACCTCGGGTG CAGGGCCATT ATGGGATCCG CCTCTATCGC
CTGACGGGCG ATGAGCAATA CGCCAACGCC GCGTTAGTCG ATCTTTATGC GGTAACCGAA
GCTCAAGCGT TTTATGCCTG CCAAGTGGAT AACCCTGAAT TTGTACGTCA AGCCTCAGAG
AACGCCATAG CAGAACTGGG CAATGGCCCC AGAGCCAAGG CCCGTAAAAA AGCCCTCGCG
CCCTTTCCTG AATTTTTATT TTATTCCGAT GTACTACTGC GATTTGCCAG TCGAATCGAT
GAGTTAGGCT TTACAGGTCC ATGCCATAGT CAAATGATCC AAGCCCTCAA AAAGGCCGAC
CTACGCCAAG GTTTGACCGA TCCCGCGATG ATTAAAGCCT GGGCAGCGCA GCTGATTAAC
TATGTGTATT GGGCCAAACA ATTGGGGGTG GGAGATTATC TAGAGGATTA TAAAACGGCA
TTTACTCGGG TTTACCCCGA CGCGCACGAT GCCACTCTCA GCAAAGCACA GTTTCGCAAT
AAGCTCTACG GCATGACGCA TTTTATCTTT GCCGCGAGTG AATATTATCA GCATCGGGTT
GATACCACTG AATTTGCATG GATTTTGGAT TACTTTGACG CCAACATTGA GCGGATTTTA
CAGGATGCGA CCGATGATAT TATTGCCGAA GTCGGCATTA GTTTTCTGCT AGCGGGCAAA
ACTGACCACC CTGTCGTGGC TCAAACTCGG GCTTATATTG CCAACTCGTT TGATGCCAAC
AGCCAAATTA TCCCCTCACC CAAGGGCAAT CCTGACTTAG CCCTTGGTGA GCATCGCAAT
GTGCTTGCGA TAATGTTGCT TAATTGGCCG GAGACGCTCT ATCCCGGCCC CTATCTTAAC
GAACTTAACG CGACAAAAAA GTATTTACCT ATGGGCGTGA CGCCTAAGGT TATCGATTAA
 
Protein sequence
MSQDLKITHT PQPKHKLTLS IALFSGLTFF TAQSAFANSQ STLLSHAGLE NSQNFLKPNT 
TDKTELSQSD VAQLIQHNLE THLYTLPPRV QGHYGIRLYR LTGDEQYANA ALVDLYAVTE
AQAFYACQVD NPEFVRQASE NAIAELGNGP RAKARKKALA PFPEFLFYSD VLLRFASRID
ELGFTGPCHS QMIQALKKAD LRQGLTDPAM IKAWAAQLIN YVYWAKQLGV GDYLEDYKTA
FTRVYPDAHD ATLSKAQFRN KLYGMTHFIF AASEYYQHRV DTTEFAWILD YFDANIERIL
QDATDDIIAE VGISFLLAGK TDHPVVAQTR AYIANSFDAN SQIIPSPKGN PDLALGEHRN
VLAIMLLNWP ETLYPGPYLN ELNATKKYLP MGVTPKVID