Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1945 |
Symbol | |
ID | 4479742 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 2312635 |
End bp | 2313834 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639726527 |
Product | hypothetical protein |
Protein accession | YP_869582 |
Protein GI | 117920390 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTCAGG ATCTGAAAAT CACCCACACA CCACAACCGA AACACAAACT CACACTATCC ATTGCGCTTT TTAGCGGTTT AACCTTCTTT ACCGCGCAGA GTGCTTTCGC CAATTCGCAA AGCACGCTCC TAAGTCACGC TGGGCTTGAG AACTCACAAA ACTTTCTCAA GCCAAACACC ACGGATAAAA CAGAATTAAG CCAAAGCGAC GTTGCGCAGC TTATTCAACA CAACCTTGAA ACCCATCTCT ATACACTCCC ACCTCGGGTG CAGGGCCATT ATGGGATCCG CCTCTATCGC CTGACGGGCG ATGAGCAATA CGCCAACGCC GCGTTAGTCG ATCTTTATGC GGTAACCGAA GCTCAAGCGT TTTATGCCTG CCAAGTGGAT AACCCTGAAT TTGTACGTCA AGCCTCAGAG AACGCCATAG CAGAACTGGG CAATGGCCCC AGAGCCAAGG CCCGTAAAAA AGCCCTCGCG CCCTTTCCTG AATTTTTATT TTATTCCGAT GTACTACTGC GATTTGCCAG TCGAATCGAT GAGTTAGGCT TTACAGGTCC ATGCCATAGT CAAATGATCC AAGCCCTCAA AAAGGCCGAC CTACGCCAAG GTTTGACCGA TCCCGCGATG ATTAAAGCCT GGGCAGCGCA GCTGATTAAC TATGTGTATT GGGCCAAACA ATTGGGGGTG GGAGATTATC TAGAGGATTA TAAAACGGCA TTTACTCGGG TTTACCCCGA CGCGCACGAT GCCACTCTCA GCAAAGCACA GTTTCGCAAT AAGCTCTACG GCATGACGCA TTTTATCTTT GCCGCGAGTG AATATTATCA GCATCGGGTT GATACCACTG AATTTGCATG GATTTTGGAT TACTTTGACG CCAACATTGA GCGGATTTTA CAGGATGCGA CCGATGATAT TATTGCCGAA GTCGGCATTA GTTTTCTGCT AGCGGGCAAA ACTGACCACC CTGTCGTGGC TCAAACTCGG GCTTATATTG CCAACTCGTT TGATGCCAAC AGCCAAATTA TCCCCTCACC CAAGGGCAAT CCTGACTTAG CCCTTGGTGA GCATCGCAAT GTGCTTGCGA TAATGTTGCT TAATTGGCCG GAGACGCTCT ATCCCGGCCC CTATCTTAAC GAACTTAACG CGACAAAAAA GTATTTACCT ATGGGCGTGA CGCCTAAGGT TATCGATTAA
|
Protein sequence | MSQDLKITHT PQPKHKLTLS IALFSGLTFF TAQSAFANSQ STLLSHAGLE NSQNFLKPNT TDKTELSQSD VAQLIQHNLE THLYTLPPRV QGHYGIRLYR LTGDEQYANA ALVDLYAVTE AQAFYACQVD NPEFVRQASE NAIAELGNGP RAKARKKALA PFPEFLFYSD VLLRFASRID ELGFTGPCHS QMIQALKKAD LRQGLTDPAM IKAWAAQLIN YVYWAKQLGV GDYLEDYKTA FTRVYPDAHD ATLSKAQFRN KLYGMTHFIF AASEYYQHRV DTTEFAWILD YFDANIERIL QDATDDIIAE VGISFLLAGK TDHPVVAQTR AYIANSFDAN SQIIPSPKGN PDLALGEHRN VLAIMLLNWP ETLYPGPYLN ELNATKKYLP MGVTPKVID
|
| |