Gene Shewana3_1938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1938 
Symbol 
ID4479735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2305690 
End bp2306706 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content49% 
IMG OID639726520 
ProductUBA/THIF-type NAD/FAD binding protein 
Protein accessionYP_869575 
Protein GI117920383 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACGA CACAAGAGCA GGCGCAATCC CTTGCCGATA AAGACTTTAT TCGTTATTCG 
CGGCAAATAT TTTTACCCGA GGTCGGCGAG GCTGGCCAGT TGCAGCTTAA ACAGGCTCAT
GTGCTTATCG TAGGCCTCGG AGGCCTTGGG CAATTGGCGG CGCAGTATTT AGCCTGCGCC
GGTGTAGGAC GCTTAACGCT TGTCGACAGC GATAGGGTGG AATTATCCAA TCTGCCAAGG
CAATTACTCT TTAGTGACGA CGATATTGGT CATCACAAAG CCTTAATTGC TAAACAGAAA
TTGGCTGTGT TGGCGCAAGA TTGTGAGATT GATGCCGTTG CTGAGCATCT GACTATTGAG
TCTGCGAACG CGGTATTTTC GAATCTGTTA GCCCATGGCA AAGAAGCTAG GTTAGTACTT
GATTGTACAG ATAATCTTGC GGCGCGCCAT TGTATCAATC GGCTGTGTAT TGAGCATGCC
TTACCTCTGG TGAGCGCATC AATTGCCGCT TTCAACGGCC AATTGTTTGC CGTTGATCAG
CAGCGTTTCC CTCAGGGAGG CTGTTATCAC TGTATTTTCC CCTCAGATAC TCGCGCGCCA
CAAAACTGTA GCAGCCAAGG TGTACTTGGC CCCAGTGTCG GCGTAATGGC ATCGATGCAG
GCGCTGCTAG CAATGCAATT GTTGCTCCTA GCCACGCCGT CAACCTCTGC AACAAAGCAA
ACAGCCAATC AGACTTTCGA AGAGGCAAGC CAACCAATAG CCTCCACGAG AGCGCTACTT
GGAAGATTTT GGCGCTTCGA TGCCAAGTTG CTGCAATGGC ATTCGGCCGC ATTAACCCGT
GATCCCGAGT GCGAAGTGTG CGGATTAAAA CCGAGTTCAT TAAAGCCGAA TTTATTAAAG
TCGAGTGAAT TAATGCCATG CGAACCAAGC AAGAGCGAAG AAAGGGCTAA TGCTAACACC
CACCATTCAA CTACAGCCGT TTCATTCAAA TCTGTCCCTA ATCGAGGTTT GTTATGA
 
Protein sequence
MITTQEQAQS LADKDFIRYS RQIFLPEVGE AGQLQLKQAH VLIVGLGGLG QLAAQYLACA 
GVGRLTLVDS DRVELSNLPR QLLFSDDDIG HHKALIAKQK LAVLAQDCEI DAVAEHLTIE
SANAVFSNLL AHGKEARLVL DCTDNLAARH CINRLCIEHA LPLVSASIAA FNGQLFAVDQ
QRFPQGGCYH CIFPSDTRAP QNCSSQGVLG PSVGVMASMQ ALLAMQLLLL ATPSTSATKQ
TANQTFEEAS QPIASTRALL GRFWRFDAKL LQWHSAALTR DPECEVCGLK PSSLKPNLLK
SSELMPCEPS KSEERANANT HHSTTAVSFK SVPNRGLL