Gene Shewana3_1867 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1867 
Symbol 
ID4477926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2212121 
End bp2212477 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content52% 
IMG OID639726449 
Producthydrogenase nickel insertion protein HypA 
Protein accessionYP_869504 
Protein GI117920312 
COG category[R] General function prediction only 
COG ID[COG0375] Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) 
TIGRFAM ID[TIGR00100] hydrogenase nickel insertion protein HypA 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGAAT ATTCCATCGT CAGCGCCTTG ATTGAGCAAT GCGAGCAACA CGCTAGGGCT 
AATCGAGCCA ATAAAATCAC CCGCGTCGAT ATCAAACTCG GCGTGATGAG CGGGGTCGAA
CCCACCTTGC TCGAGACCGC CTTTGAAACC TTTAAACTCG ATGGGCTCTG CCGTGATGCT
GAACTGCGAA TGACGCTGCA ACCCTTAGTG ATTGCCTGTT TGGATTGCCA CCAAGAGTCT
GAGCTTGCTG AGCGCTCTAT CGTCTGCCCT GCGTGTCACA GCTACCACAC GCGGGTATTA
GATGGCGAAG ATATGCTACT GATGCAGCTT GAAATGGAGC AAGAAGACGA GCGCTAA
 
Protein sequence
MHEYSIVSAL IEQCEQHARA NRANKITRVD IKLGVMSGVE PTLLETAFET FKLDGLCRDA 
ELRMTLQPLV IACLDCHQES ELAERSIVCP ACHSYHTRVL DGEDMLLMQL EMEQEDER