Gene Shewana3_1792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1792 
Symbol 
ID4477481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2120257 
End bp2121144 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content44% 
IMG OID639726376 
Producthypothetical protein 
Protein accessionYP_869431 
Protein GI117920239 
COG category[S] Function unknown 
COG ID[COG2445] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.210053 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTCG ACTTAGGATT GGTACACTTA CAATATGACA ATTTCAAAGC CAAACCAATG 
ACGATCGAAC AGATCCAGAA TTTGCATCAA CTAAGCGCTT TAGCTGCAAG CCATCCTGAG
GTGGCGGTAT TATGGCTTTA TGGTTCGCAG GCGAAAGGAA ATGCTAGCGA GCATAGCGAT
TGGGATTTAG CCGTCGCATT CGACCCGGTA AAGGCAGATA GTGTGCTTGA TACTCGTATT
AGAGCTGAAC TGCTTGCTAT GGATTGGCAA AGAGCATTGG GGCTAGCCGA AGGGAAGCTT
TCAGTTGTCG ATATCAATCT AGCACCAATC CCTTTGGCCT ACGGTATCAT TAATGCCAAC
AAACTTATTT TTAGTCGAGA TGAAGGTCGA AGAATGCAAG AAGAGTCCCG CATTATGTCG
CAAATGGAAC TCGATTATTC AGCCCCAAGC CACTTTATTA TTTTGGATAA TGCCTATATC
ACGTCATTGA GTTTAAGCCT TAGCCAGTAC CAAGCCGAAC TTGGAGAGTT ACGTCAATTA
CTTAGTCAGC GTTCCTTATC TAATCTCGAA TATCGAGCAG CAGAGCGCAC ACTACAGGTC
TCTATTGAAG CTTGCATTGA CATTGCAAAA CACTGGGCTA AGGCACTTGC AGGACATAGT
CCGCAGGATG CCTACCAAAC ATTTGAGATC CTGTGTCAAC GAGGAACACA AACAGCTGAT
GAATTAAATG GCTGGCGTAA AGTGATAGGC CTGCGTAATG CTCTGGTACA TGATTATCTG
AATATTGACC CTGAGATCAT CCGCAGTGTG ATCTCTCAAG GTTATAGCGA TAGATTATTT
GCCTTTGCAG AGCAGGAGTT GGAATGGTTA TCTTTGAAGA CTGACTAA
 
Protein sequence
MKFDLGLVHL QYDNFKAKPM TIEQIQNLHQ LSALAASHPE VAVLWLYGSQ AKGNASEHSD 
WDLAVAFDPV KADSVLDTRI RAELLAMDWQ RALGLAEGKL SVVDINLAPI PLAYGIINAN
KLIFSRDEGR RMQEESRIMS QMELDYSAPS HFIILDNAYI TSLSLSLSQY QAELGELRQL
LSQRSLSNLE YRAAERTLQV SIEACIDIAK HWAKALAGHS PQDAYQTFEI LCQRGTQTAD
ELNGWRKVIG LRNALVHDYL NIDPEIIRSV ISQGYSDRLF AFAEQELEWL SLKTD