Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1481 |
Symbol | |
ID | 4478118 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 1724298 |
End bp | 1725122 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639726051 |
Product | sporulation domain-containing protein |
Protein accession | YP_869121 |
Protein GI | 117919929 |
COG category | [S] Function unknown |
COG ID | [COG3147] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.896117 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGTCTAGCC AGTTTCATAA TCGATTAGTC GGCACTGTGG TGCTGGTCGC CCTCGGGGTG ATTTTTCTGC CGGATATTTT AGATGGCAAG AAGGAGCGTC AAGAGGAACA ATTTGCCGAA ATTCCCCTGC GTCCAGCCGC GATAGCGCAG CAAAACGCCG ATGATATGTT TGAGGTGTTG TCCACCCAAG ATGTGGATGG CGAAGGTGCT TTACCCGAAG AGGCTTCTCC GAATGATGAG GCGGCGTTAG CGCAGGCGGT CAATACTGAT GTCAAAGACG CGCCTGCGGC AAAAGTCGAG CCTAAGTCGG AAGCGGTGAA AGAGACCGCC AAACCACAGA CGGCAAAAGC GGAAACTAAG CCTGAGGTGA AAGCGCCTGC GAAAACCGAG ACCGCTAAGG CCGAACCGAA GAAAGAGACG CCAAAGCCGA CTCCAACTAA AACAGAAACC AAAAAGCCAG AAACCAAGCC AACCGTAGTC GCGAAAACGG ACAAGCCTAA AGCCGAAACC GCGAAAACAG AATCTGCAAA ACCTGCCAAA GACGATGGCA TTAAAGTGGT CAGCCGCGAT TCATTAAAAC CTGGACTTAC CCTGCAACTA GGCGCATTTA GCAATGCCGC CAACGTAAAA GCGCTGGTGG CGCAGTTACG TAAAAGTGGT TACAAGGCGT ACACAATTCC AGACACGCCT AAGGATGGCG TATTGACGAA AGTGTTTGTG GGACCCGATG TTTCCGAAGC TAAGCTGAAG AAAATGCAGG AAGAAATTGA AACTCTAACC CGTTTGAAAG GCCGGATTGT GCCTTTTAAT CCCTTGGAAT CTTAA
|
Protein sequence | MSSQFHNRLV GTVVLVALGV IFLPDILDGK KERQEEQFAE IPLRPAAIAQ QNADDMFEVL STQDVDGEGA LPEEASPNDE AALAQAVNTD VKDAPAAKVE PKSEAVKETA KPQTAKAETK PEVKAPAKTE TAKAEPKKET PKPTPTKTET KKPETKPTVV AKTDKPKAET AKTESAKPAK DDGIKVVSRD SLKPGLTLQL GAFSNAANVK ALVAQLRKSG YKAYTIPDTP KDGVLTKVFV GPDVSEAKLK KMQEEIETLT RLKGRIVPFN PLES
|
| |