Gene Shewana3_1481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1481 
Symbol 
ID4478118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1724298 
End bp1725122 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content50% 
IMG OID639726051 
Productsporulation domain-containing protein 
Protein accessionYP_869121 
Protein GI117919929 
COG category[S] Function unknown 
COG ID[COG3147] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.896117 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCTAGCC AGTTTCATAA TCGATTAGTC GGCACTGTGG TGCTGGTCGC CCTCGGGGTG 
ATTTTTCTGC CGGATATTTT AGATGGCAAG AAGGAGCGTC AAGAGGAACA ATTTGCCGAA
ATTCCCCTGC GTCCAGCCGC GATAGCGCAG CAAAACGCCG ATGATATGTT TGAGGTGTTG
TCCACCCAAG ATGTGGATGG CGAAGGTGCT TTACCCGAAG AGGCTTCTCC GAATGATGAG
GCGGCGTTAG CGCAGGCGGT CAATACTGAT GTCAAAGACG CGCCTGCGGC AAAAGTCGAG
CCTAAGTCGG AAGCGGTGAA AGAGACCGCC AAACCACAGA CGGCAAAAGC GGAAACTAAG
CCTGAGGTGA AAGCGCCTGC GAAAACCGAG ACCGCTAAGG CCGAACCGAA GAAAGAGACG
CCAAAGCCGA CTCCAACTAA AACAGAAACC AAAAAGCCAG AAACCAAGCC AACCGTAGTC
GCGAAAACGG ACAAGCCTAA AGCCGAAACC GCGAAAACAG AATCTGCAAA ACCTGCCAAA
GACGATGGCA TTAAAGTGGT CAGCCGCGAT TCATTAAAAC CTGGACTTAC CCTGCAACTA
GGCGCATTTA GCAATGCCGC CAACGTAAAA GCGCTGGTGG CGCAGTTACG TAAAAGTGGT
TACAAGGCGT ACACAATTCC AGACACGCCT AAGGATGGCG TATTGACGAA AGTGTTTGTG
GGACCCGATG TTTCCGAAGC TAAGCTGAAG AAAATGCAGG AAGAAATTGA AACTCTAACC
CGTTTGAAAG GCCGGATTGT GCCTTTTAAT CCCTTGGAAT CTTAA
 
Protein sequence
MSSQFHNRLV GTVVLVALGV IFLPDILDGK KERQEEQFAE IPLRPAAIAQ QNADDMFEVL 
STQDVDGEGA LPEEASPNDE AALAQAVNTD VKDAPAAKVE PKSEAVKETA KPQTAKAETK
PEVKAPAKTE TAKAEPKKET PKPTPTKTET KKPETKPTVV AKTDKPKAET AKTESAKPAK
DDGIKVVSRD SLKPGLTLQL GAFSNAANVK ALVAQLRKSG YKAYTIPDTP KDGVLTKVFV
GPDVSEAKLK KMQEEIETLT RLKGRIVPFN PLES